Gene Snas_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1283 
Symbol 
ID8882469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1360086 
End bp1360856 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_003510085 
Protein GI291298807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.603625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACA CACTCCTGGC CGCAGGTGGC GCCGTCACGA CCGGTGAGGC CATCACCTTC 
TGGATCCTGG CGCCGATCAT CCTCGGCGGC GCCATCGGCA TGGTCCTGGC CCGCTCCGCC
GTCCACTCGG CACTGCTGCT GGCCTGCACC ATGCTGGGCC TGGGCGTGAT CTACATGCTC
CAGTCGGGGC CGTTCATCGG CTTCGTCCAG ATCATCGTCT ACACCGGCGC CATCATGATG
CTGTTCCTGT TCGTCATCAT GCTGGTGGGC CGCGACTCCA AGGACTCGCT GCTGGAAACC
CTGCGCGGCC AACGCATCGC CGCCATCGGA TTGGGCATCG GCATGGCCCT TTTGCTGTGC
ACCGGCCTGG CCCGCGGCGT GGGCGCCGTG TCCGCCGTCG GCCTCGACGA GGCCAACGCC
AACGGCAACG TCAAGGGCAT CGCCGCCGAA CTGTTCACCA AGTACGTCTT CGCCTTCGAG
GTCACCTCCG CCCTGCTCAT CACCGCCGCC GTCGGCGCGA TGGTCCTGGC ACACGTCGAG
AAGGCCAAAG AGGACAAACT CGGGCAGAAG AAGTCCTCCC GACTGCGGTT CGCCAAGGGC
AACTACCCCG GACCCAAGGC CGGACCCGGC GTCTTCGCCA CCTCCGACTC GGTGGCCACC
CCGGCGCTGC TGCCCGACGG CACCGAAAGC GAACGCTCCA TCTCGCCGGT CGTGCCGCCC
CGCGAACTCG AACCCGCCGA AGCCGCACCC AAGCCAACGG AGGGCCGCTG A
 
Protein sequence
MTHTLLAAGG AVTTGEAITF WILAPIILGG AIGMVLARSA VHSALLLACT MLGLGVIYML 
QSGPFIGFVQ IIVYTGAIMM LFLFVIMLVG RDSKDSLLET LRGQRIAAIG LGIGMALLLC
TGLARGVGAV SAVGLDEANA NGNVKGIAAE LFTKYVFAFE VTSALLITAA VGAMVLAHVE
KAKEDKLGQK KSSRLRFAKG NYPGPKAGPG VFATSDSVAT PALLPDGTES ERSISPVVPP
RELEPAEAAP KPTEGR