Gene Snas_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1280 
Symbol 
ID8882466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1355799 
End bp1358192 
Gene Length2394 bp 
Protein Length797 aa 
Translation table11 
GC content71% 
IMG OID 
ProductNADH-quinone oxidoreductase chain G 
Protein accessionYP_003510082 
Protein GI291298804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.47873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA CCGTCACGCT CACCATCGAC GGACTCGAAG TGACCGTTCC CAAGGGGACG 
CTGGTCATCC GGGCCGCCGA ACAGCTGGGC ATCGAGATTC CCCGCTTCTG CGACCACCCG
CTGCTGGAGC CCGCCGGTGC CTGTCGGCAG TGCCTCGTCG ACGTCGAGGG ACAGCGCAAG
CCGCTGGCCT CGTGCACCGC GACCTGCACC GACGGCATGG TCGTCAAGAC CCAGCTGACC
TCCCCTGTGG CCAAGAAGGC CCAGGAGGGG ATCATGGAGT TCCTGCTCAT CAACCACCCG
CTCGACTGTC CGATGTGCGA CAAGGGCGGC GAGTGCCCAC TCCAGAACCA GGCGATGAGC
ACCGGCCGCA CCGAGTCCCG CTTCACCGAA CAGAAGCGGA CCTTCAAGAA GGCCAAGCCG
ATCTCCTCGC AGGTGCTGCT GGACCGGGAA CGCTGCGTCC TGTGTCAGCG CTGCACCCGC
TTCAGCGACG AGATCGCCGG TGACCCGTTC ATCGACCTGA TGGAACGCTC CTCGCAGGAG
CAGATCGGCA CCGCCGAGGG CGAGGACTTC GAGTCCTACT TCTCCGGCAA CACCGTCCAG
ATCTGCCCGG TGGGCGCCCT GACCGGTACC CAGTACCGGT TCCAGGCCCG GCCCTTCGAC
CTGGTCTCCA GCCCCAGCGT GTGCGAACAC TGCTCGGCCG GTTGCGCGCA GCGCACCGAC
CACCGGCGCG GCAAGGTGCT GCGGCGGCTG GCCGGCGACG ACGCCGAGGT CAACGCCGAG
TGGAACTGCG ACAAGGGCCG CTGGGCCTTT GACTACGTCA ACACCGACAA CCGGATCCTC
ACCCCGCTGG TGCGCGGTGA CGACGGCGAA CTGCACGAGG CCTCCTGGCC CGACGCGCTG
CGCGCCGCCG CCGCCGGACT CAAGCGCGCC AAGGGCGCCG GTGGCGTCGG CGTCCTGACC
GGTGGCCGCC TGACCGTCGA GGACGCCTAC GCGTACTCGA AGTTCGCGCG CCTCGCGTTG
GACACCAACG ACATCGACTT CCGGGCCCGC CCGCACTCCG ACGAGGAGGC GACGTTCCTG
GGCAACGCCG TGGCCGGTAT CCACCCGGCC TCCGGCGCCG TCACGTACTC CGAAGTGGAC
AAGGCTCCGG CCGTCCTCAT CGCCGGTCTG GAGACCGAAG AGGAATGCCC GATCCTGTTC
CTGCGGCTGC GCAAGGCCAA CCGCGACACC GGCCTGAAGC CGTACGTCGT GGCGCCGTTC
GCCACCCGCG GCACCGAGAA GTTCGGCGGC GAGCTCATAC CCACCGTCCC CGGTGGTGAG
GCCGCGCTGC TGTCCGGTTA CGCCGACGGC GGCGACATGT CCGACACGCT GCGGGCACCC
GGCAGCCTCA TCCTGGTCGG CGAACGCCTC GCCACCGTCC CCGGCGCCCT GACCGCCGCG
GCCCGGCTGG CCAAGGCCAC CGGCGCCAAA CTGGCCTGGG TGCCGCGCCG CGCCGGCGAC
CGGGGCGCCG TCGACACCGG TCTGCTGCCC ACCCTGCTGC CCGGCGGCGG CGAGGTCGAC
AACGACGCCG CCCGCGACGC GCTGGCGTCC TACTGGGACG TCGAGGCGCT GCCGGGCCAG
CCCGGCCGCG ACACCAACGC GATCCTGGCC GCCGCCGCCG ACCGGGAACT GGGCGGTCTG
CTGATCGCCG GGGTCGACCC CTTCGACCTG CCCGACCCGT CCGCGGCCGA AGCCGCCCTG
TACACCGCGA ACTTCATCGT CTCGGTCGAA CAGCGGCACA CCGCCGTCAC CCGCCGGGCC
GCCGTGGTCC TGCCCATCGC CACCGTCCCC GAGAAGGACG GCGCCTACCT CAACTGGGAA
GGACGGCTGC GCACCTTCGA AGCCGCCATC GACTCCTCCC TGATGAGCGA CTACCAGGTC
CTGGACGCGC TGGGCGCGGC CATGGGCGTG GAGTTGGGCT TCGAATCGCT GGCCAAGGTC
CGCGGCGAAC TGGCCGGGGT CCCCGAGCCG GCCGCCCGCG CCGCCGCCCC GCTGGTGTCG
GCCGAAGCCG TGGTCACCCC CGCCGAGGGC AACGCCGTCC TGGCGACCTG GCACCACCTG
CTGGACTCGG GAACGTTGCA GGACAACAAC ACCCACCTCG CCGGCACCGC CGCCACCCCG
GTGGTGAGGC TGTCGCACGG GACCGCGGCG TCCATCGGCG CCGCCGAGGG CCAGCCGGTG
ACGGTCGCCA GCTCCTCGGG CGGCATCACG CTGCCGCTGG CCGTCACCCG CATGCCCGAC
GGCGTGGTGT GGCTGCCCAC CAACTCGCCC GGATCGGGTG TCTACCGAGG ACTCGGCGTC
GCCGCTGGCG ACATCGTGTC GATCGCCACC TACAACGGAG GCAACCGTGA CTAA
 
Protein sequence
MTETVTLTID GLEVTVPKGT LVIRAAEQLG IEIPRFCDHP LLEPAGACRQ CLVDVEGQRK 
PLASCTATCT DGMVVKTQLT SPVAKKAQEG IMEFLLINHP LDCPMCDKGG ECPLQNQAMS
TGRTESRFTE QKRTFKKAKP ISSQVLLDRE RCVLCQRCTR FSDEIAGDPF IDLMERSSQE
QIGTAEGEDF ESYFSGNTVQ ICPVGALTGT QYRFQARPFD LVSSPSVCEH CSAGCAQRTD
HRRGKVLRRL AGDDAEVNAE WNCDKGRWAF DYVNTDNRIL TPLVRGDDGE LHEASWPDAL
RAAAAGLKRA KGAGGVGVLT GGRLTVEDAY AYSKFARLAL DTNDIDFRAR PHSDEEATFL
GNAVAGIHPA SGAVTYSEVD KAPAVLIAGL ETEEECPILF LRLRKANRDT GLKPYVVAPF
ATRGTEKFGG ELIPTVPGGE AALLSGYADG GDMSDTLRAP GSLILVGERL ATVPGALTAA
ARLAKATGAK LAWVPRRAGD RGAVDTGLLP TLLPGGGEVD NDAARDALAS YWDVEALPGQ
PGRDTNAILA AAADRELGGL LIAGVDPFDL PDPSAAEAAL YTANFIVSVE QRHTAVTRRA
AVVLPIATVP EKDGAYLNWE GRLRTFEAAI DSSLMSDYQV LDALGAAMGV ELGFESLAKV
RGELAGVPEP AARAAAPLVS AEAVVTPAEG NAVLATWHHL LDSGTLQDNN THLAGTAATP
VVRLSHGTAA SIGAAEGQPV TVASSSGGIT LPLAVTRMPD GVVWLPTNSP GSGVYRGLGV
AAGDIVSIAT YNGGNRD