Gene Snas_1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1268 
Symbol 
ID8882454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1344901 
End bp1346016 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content72% 
IMG OID 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003510070 
Protein GI291298792 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0160368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA ACGGCACCCG CGCCGCCACG ATCCTGAACC GCCCGATCCA GCTGGGCGAA 
CTGTCACTGC GCAACCGGAT CGCGATGGCA CCCATGACCC GGCAGTTCTC GCCCGGCGGG
GTCCCCGACG CCGACGTGGC CGCCTACTAC GCGCGCCGGG CCGCCGGTGG CGTCGGCCTG
ATCGTCACCG AGGGCACCTA CATCGGACAC GAATCCGCCG GTTCCAGCGA CCGCGTGCCC
CGCTTCCACG GCGAGGACGC ACTCGCGGGC TGGGCCGCGG TCGCCGACGC GGTGCACGCC
GCCGGGGGTC GCGTCTTCCC GCAGCTGTGG CACGTCGGCA TGGACCGCGC CGCCGGAACT
CCGCCGGTGG CCGAGGCCCC GCCGATGGGT CCGTCGGGCA TCCCGCTGGA CGACCGCCCC
GCGGGCAAGA CCATGACCCC GACCGACCTC GACGAGGTCA TCGAAGCCTT CGCCACCGCC
GCGGCCGCCG CCCAGGCCGC GGGCTTCGAC GGCGTCGAAC TGCACGGCGC CCACGGCTAC
CTCATCGACC AGTTCCTGTG GGAGCACACC AATCGCCGCA CCGACAGCTA CGGCGGCGAC
ATTGCCGGAC GCACCCGCTT CGCCGCCGAG ATCGTGTCGG CCTGCCGCGC GGCGGTGACA
CCGGGCTTCC CCATCAGCTT CCGGATGTCA CAGTGGAAGA TGGGCGCCTA CCAGGCGAAG
CTGGCCGAGT CTCCACAAGA GCTCGACGCG GTCCTCGCCC CGCTGGCCCG CGCCGGTGTC
GACGCTTTCC ACTGCTCGAC CCGCCGCTAC TGGCTGCCGG AGTTCGACGG CTGCGACCTG
AACCTGGCGG GCTGGGTCAA GAAACTGACC GGCAAACCCA CGATCACGGT CGGCGCGGTC
GGTCTGGCCA ACGAGTTCCT CCAATCCCTG CAAGGCGACC AGACCGACGC CACGTCGATC
GACGGCCTGC TCGACCGCCT GGAAGCCGAC GAGTTCGACA TGGTCGCGGT GGGCCGGGCC
CTGCTGGCCG ACCCCGCATG GGCCGCCAAG ACCCTGGCCG GACGCCACGA CCAGGTGACG
CCGTTCGAGC CGTCGATGCT GGGCCGGCTG CACTGA
 
Protein sequence
MADNGTRAAT ILNRPIQLGE LSLRNRIAMA PMTRQFSPGG VPDADVAAYY ARRAAGGVGL 
IVTEGTYIGH ESAGSSDRVP RFHGEDALAG WAAVADAVHA AGGRVFPQLW HVGMDRAAGT
PPVAEAPPMG PSGIPLDDRP AGKTMTPTDL DEVIEAFATA AAAAQAAGFD GVELHGAHGY
LIDQFLWEHT NRRTDSYGGD IAGRTRFAAE IVSACRAAVT PGFPISFRMS QWKMGAYQAK
LAESPQELDA VLAPLARAGV DAFHCSTRRY WLPEFDGCDL NLAGWVKKLT GKPTITVGAV
GLANEFLQSL QGDQTDATSI DGLLDRLEAD EFDMVAVGRA LLADPAWAAK TLAGRHDQVT
PFEPSMLGRL H