Gene Snas_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1266 
Symbol 
ID8882452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1343196 
End bp1343897 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510068 
Protein GI291298790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0147232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCG GAATCATCGG AGCCACCGGC AACATCGGTC AGCGACTCGT CGTCGAAGCC 
CTGGATCGGG GCCACCGCGT GACGGCCTTC AGTCGCGACG CCTCCGGCAT CGCCGACGAC
CGCGACGGCG TGACCTGGCG AAGCCTCGAC GTACTCGACA CCGACGCGGT GGCCAAGGCC
ATCGGCGGAC TCGACGTCCT CATCAGCGGC TTCCAGCCGG GCAACGCGGC CAAGGACCTC
GACGACACCC TGAAGCGATC CATCGCCGAT CCCGGCATCT ACGCGGAGGT CGCGCGATCC
CTGGTGACGG CGCTGGCCGC GCACCCCCGG GTTCGGCTGA TCGTGATCGG CGGCGCCGGA
AGCCTGGAGA CCTCGCCGGG CGTGGTCGGC GCGGACGACA CCGCCAAACT GGAGGACGTG
CTGGAACAGC TGGGTCTGCC GCGCGAGTAC GCCGTGTCGG TGCGCGGCGC CCGCGACTCC
CTCAACGTCT ACCGCACCTC GAATCGACTG TGGACCTACT TCAGTCCGGC CGACGACATC
CGGGCCGGTC AGCGCACCGG TCGGTTCCGG CTGGGCGGCG ACCAGGTCCT CACCGACGCC
GACGGCCTGA GCCGCATCTC CTTCGAGGAC GCGGCGGTCG CCCTGATCGA CGAGGCCGAA
CTGCCCCAGC ACGTACAGCG CCGCTTCACC GCCGCCTACT AG
 
Protein sequence
MHIGIIGATG NIGQRLVVEA LDRGHRVTAF SRDASGIADD RDGVTWRSLD VLDTDAVAKA 
IGGLDVLISG FQPGNAAKDL DDTLKRSIAD PGIYAEVARS LVTALAAHPR VRLIVIGGAG
SLETSPGVVG ADDTAKLEDV LEQLGLPREY AVSVRGARDS LNVYRTSNRL WTYFSPADDI
RAGQRTGRFR LGGDQVLTDA DGLSRISFED AAVALIDEAE LPQHVQRRFT AAY