| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1260 |
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| Symbol | |
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| ID | 8882446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 1338427 |
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| End bp | 1339095 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003510062 |
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| Protein GI | 291298784 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.194739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGA CGAAGCCCCG CAAGGCCGGA CGCCCCCGCA AGGAAGAGGC CACCGACACC
CGGACGGTAC TGCTGGACGC CGCGCTGAAA CTGTTCGTGG CCAAGGGTTT CGCCGCGACC
TCGGTGCGCA TGATCGCCCG CGCCGCCGGA CTGTCCGACG GCGGCCTGTA CGCCCACTTC
CCCAGCAAAC AGGCCGTCTA CGACGAACTG CTGGCCAGCG CCGGTCCCGG CGTCGTGGAC
GGCATGGTCG CCGAACTGCT GCCCGAGGCC GGGACACCGC CGCAGGATCC CGAGACCTTC
CTCACCCAAC TGGTGGGCCG GATCCTCGAC TACTTCGAGA CCCCCGCCGC CCGCGACTTC
AGCCTGCTGT TGCTGCGCGA GGAGATCCCC GGCAACGGCG ACCTGGTCAC CGCGATGATC
GACAAGGGCG CCGCCGCCCT GGGGCCGGTG GTCACGGAGT GGGCCAAGGC GGGACACCTG
CCCGACCGGG TGCGACAACG ACTGGACGCG GGCACCGTCA CCGGCGAGTC GCTGATGTGG
GAACTGTTGG CGCCCTTGGG TTTCGTCCGG CTGGTCTACC TGCACGGGAC CGACGAGTCC
CGCGCCGAGG GCAGGCGCCG GGCCGACGCG CACCTGGAGT TCTTCCTGAA CGCGGTGGTG
CGCGACTAG
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| Protein sequence | MTATKPRKAG RPRKEEATDT RTVLLDAALK LFVAKGFAAT SVRMIARAAG LSDGGLYAHF
PSKQAVYDEL LASAGPGVVD GMVAELLPEA GTPPQDPETF LTQLVGRILD YFETPAARDF
SLLLLREEIP GNGDLVTAMI DKGAAALGPV VTEWAKAGHL PDRVRQRLDA GTVTGESLMW
ELLAPLGFVR LVYLHGTDES RAEGRRRADA HLEFFLNAVV RD
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