Gene Snas_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1258 
Symbol 
ID8882444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1336469 
End bp1337626 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content67% 
IMG OID 
ProductRadical SAM domain-containing protein 
Protein accessionYP_003510060 
Protein GI291298782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.616603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGACCG AGATCGCCGA AATCCTGCAG CGAGGCGCCG ACGGCGGGCG CATCACCACC 
GAAGAGGCGC TGCTGTTGTA CACCGAGGCG CCCTTCCACG AGCTGGGTGA GGCCGCCGAC
GCGGTGCGGC GACGCCGCTA CCCCGAGGGG ATCGTCACCT ACCTGATCGA CCGCAACATC
AACTACACCA ACGTGTGCGT CACCGCGTGC AAGTTCTGCG CCTTCTACCG GGCGCCGAAG
CACAAGGAGG GTTGGAGCCA CGACCTCGAC GAGATCCTGC GTCGCTGTGC CGAGGCGATC
GACCTGGGTG CCACCCAGGT GATGTTGCAG GGCGGTCACC ACCCCGAGTT CGGGGTCGAG
TACTACGAGG AACTGTTCGG CGCGGTCAAG CGCGAGTTCC CGCAGCTGGC GATCCACTCC
ATCGGGCCGT CCGAGATCGG TCACATGGCG AAGGTGTCGG AGGTCTCGAT CGAGGAGGCC
ATCAAGCGCA TCAAGGCCGC CGGGCTGGAC TCGATCGCCG GGGCCGGGGC CGAGATGCTG
CCCGAGCGTC CCCGCAAGGC GCTGGCGCCG TTGAAGGAGT CGGGTGAGCG CTGGTGCGAG
ATCATGGAGG TCGCGCATGG TCTGGGCCTG GAGTCCACCG CGACGATGAT GATGGGCACC
GGCGAGACCA ACGCCGAACG CATCGAGCAT CTGCGGATGA TCCGCGACGT CCACGACAAG
ACCGGCGGTT TCCGGGCCTT CATCCCGTGG ACCTACCAGC CGGAGAACAA CCACCTCAAG
GGACGCACCC AGGCCACCAC TGTGGAGTAC CTGCGGATGC TGGCCACCGC GAGGCTGTAC
TTCAACGAGA TCGCGCACCT GCAGTCGTCC TGGCTGACCA CCGGCAAGGC GGCCGGGCAG
GTCTCGCTGC ACATGGGAGT GGACGACCTC GGCTCGATCA TGCTGGAGGA GAACGTCATC
TCCTCGGCCG GTGCCCGGCA CCGCTCGAAC CTGCACGGGC TCATCGACAT GATCCGCAGC
GCCGGACGCG TTCCCGCGCA CCGCAACACG CTGTACGAGC ACCTGTCGGT GCACTGGACG
CCGGAGGACG ACCCGACCGA CGAGCGGGTG CGTTCGCACG TGTCGTCCAT CGCGTTGCCG
TTGGTGGAGT CCACGTAG
 
Protein sequence
MSTEIAEILQ RGADGGRITT EEALLLYTEA PFHELGEAAD AVRRRRYPEG IVTYLIDRNI 
NYTNVCVTAC KFCAFYRAPK HKEGWSHDLD EILRRCAEAI DLGATQVMLQ GGHHPEFGVE
YYEELFGAVK REFPQLAIHS IGPSEIGHMA KVSEVSIEEA IKRIKAAGLD SIAGAGAEML
PERPRKALAP LKESGERWCE IMEVAHGLGL ESTATMMMGT GETNAERIEH LRMIRDVHDK
TGGFRAFIPW TYQPENNHLK GRTQATTVEY LRMLATARLY FNEIAHLQSS WLTTGKAAGQ
VSLHMGVDDL GSIMLEENVI SSAGARHRSN LHGLIDMIRS AGRVPAHRNT LYEHLSVHWT
PEDDPTDERV RSHVSSIALP LVEST