Gene Snas_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1249 
Symbol 
ID8882435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1324419 
End bp1325150 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510052 
Protein GI291298774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.106089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGCT GGCTGCGGGC GTGTGCGGGG CGTCCGGAAA CCCGATGGGA GACCACAGTC 
GACTTCTGGT CGCGGGTCAC CGGCACGCTG CCCGAGTGGC GCAGTCCCGG CGACGTCTGG
CTGGAACCCG TCTCCGGCGA CGGGATGCTC GCCCTGACCA ACCGCGCCGC CGCGGCGGCC
ACCCGGGTGG ACCTGGTCGT CGACGACGCC GAAGCCGTGG TGCGCCGGGC CTTCGAGCTG
GGGGCCACGG CCAGCAACGA CGACGGCGAG CACGTCACCG GCCGCTCCCC GGGCGGGCTG
ACCTTCCACA TCGCCGCCGC GCCGGACTCC GAACTCGCCG AACCACCGGT CCTGGAACAC
CCCAACGGTT CCCTCAGCGG CCTCGACCAG ATCTGCGTCG ACATCGGACC ATCCGATTGG
GACACCGAGC TCGCGTTCTG GTCGGACCTG ACCGGCCACA AGGCCCGCAC CGGCGCCCGC
CCGGAGTACG CCTGGATCAA GGGCCCCAAC GGCCGCACGT CCCGGCTGCT GTTGCAGCGC
CTGGACGAGG ACCGACCCAC CAGCGCCCAT CTCGACTTCG CCTGCTCCGA CGTCGCGGCG
GTGTGCGAGG CCCACGTCGC CGCCGGAGCC CGCAGCGGCG ACGTGTTCCC GTGGTGGACG
GTCATGTACG ACCCGTCCGG CGCCGTCTAC TGCCTGACCG CCCGCGACCC CGTGACCGGG
GCGCTGCCGT AG
 
Protein sequence
MVRWLRACAG RPETRWETTV DFWSRVTGTL PEWRSPGDVW LEPVSGDGML ALTNRAAAAA 
TRVDLVVDDA EAVVRRAFEL GATASNDDGE HVTGRSPGGL TFHIAAAPDS ELAEPPVLEH
PNGSLSGLDQ ICVDIGPSDW DTELAFWSDL TGHKARTGAR PEYAWIKGPN GRTSRLLLQR
LDEDRPTSAH LDFACSDVAA VCEAHVAAGA RSGDVFPWWT VMYDPSGAVY CLTARDPVTG
ALP