Gene Snas_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1244 
Symbol 
ID8882430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1316509 
End bp1317258 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content72% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003510047 
Protein GI291298769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.801422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGT TCACAGGCAA GAAGGCCGTC GTCACCGGCG GGACCCACGG CATGGGGCTG 
GGCATCGTCC GGGCGCTGGC CGCGGGCGGC GCCGAGGTGG TGCTGACCGG CCGCGACGAA
CGCAAGGTCG AGCAGGCCCG CGACCAGCTG AACATCCCGG GCGTCCACGT GGTCCGCTCC
GACGCGACCA GTGCCGCCGA CATCGACGCG CTGGGCGGCT TCGTCGCCGA GACCCTCGGG
CGCGTCGACG CCGTGTTCGT CAACCACGGT GTCGCCGAGT TCCAGACCCT CGGCGAGCTG
ACCGCCGACT CCTTCGACAA GCAGTTCGCC GTCAACACCA AGGGCGCGGT GTTCACCGTG
AAGCGGCTGG CGCCGCTGCT GCGCGACGGC GGCTCGGTCA CGTTCACGAC CGTCGCCAAC
GACCGGATCT TCCCCGGTCT GAGCGGCTAC TCCGGTTCCA AGGAGGCGCT GCACGCGATC
GCGAAGGTGC TGGCCGCCGA GTTCCTGCCC CGGCGGATCC GGGTGAACTC GGTGGCTCCC
GGCTACATCA AGACTCCGTC CATGGGCGTG CCCGGGCTGT CCGACGCCGA ACGCGCGGCC
TTCGAGGCCG AGGGCGACCA GACCCCGCTG GGGCGGCTCG GCTCGATCGA GGAGGTCGCC
GCGGCGGCGC TGTTCCTGGG TTTCGACGCC ACCTACACCA CCGCGGCCGA GCTGGCCGTG
GACGGCGGGT TCGCGCAGGG CATCGCCTGA
 
Protein sequence
MSRFTGKKAV VTGGTHGMGL GIVRALAAGG AEVVLTGRDE RKVEQARDQL NIPGVHVVRS 
DATSAADIDA LGGFVAETLG RVDAVFVNHG VAEFQTLGEL TADSFDKQFA VNTKGAVFTV
KRLAPLLRDG GSVTFTTVAN DRIFPGLSGY SGSKEALHAI AKVLAAEFLP RRIRVNSVAP
GYIKTPSMGV PGLSDAERAA FEAEGDQTPL GRLGSIEEVA AAALFLGFDA TYTTAAELAV
DGGFAQGIA