Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1244 |
Symbol | |
ID | 8882430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 1316509 |
End bp | 1317258 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003510047 |
Protein GI | 291298769 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.801422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGGT TCACAGGCAA GAAGGCCGTC GTCACCGGCG GGACCCACGG CATGGGGCTG GGCATCGTCC GGGCGCTGGC CGCGGGCGGC GCCGAGGTGG TGCTGACCGG CCGCGACGAA CGCAAGGTCG AGCAGGCCCG CGACCAGCTG AACATCCCGG GCGTCCACGT GGTCCGCTCC GACGCGACCA GTGCCGCCGA CATCGACGCG CTGGGCGGCT TCGTCGCCGA GACCCTCGGG CGCGTCGACG CCGTGTTCGT CAACCACGGT GTCGCCGAGT TCCAGACCCT CGGCGAGCTG ACCGCCGACT CCTTCGACAA GCAGTTCGCC GTCAACACCA AGGGCGCGGT GTTCACCGTG AAGCGGCTGG CGCCGCTGCT GCGCGACGGC GGCTCGGTCA CGTTCACGAC CGTCGCCAAC GACCGGATCT TCCCCGGTCT GAGCGGCTAC TCCGGTTCCA AGGAGGCGCT GCACGCGATC GCGAAGGTGC TGGCCGCCGA GTTCCTGCCC CGGCGGATCC GGGTGAACTC GGTGGCTCCC GGCTACATCA AGACTCCGTC CATGGGCGTG CCCGGGCTGT CCGACGCCGA ACGCGCGGCC TTCGAGGCCG AGGGCGACCA GACCCCGCTG GGGCGGCTCG GCTCGATCGA GGAGGTCGCC GCGGCGGCGC TGTTCCTGGG TTTCGACGCC ACCTACACCA CCGCGGCCGA GCTGGCCGTG GACGGCGGGT TCGCGCAGGG CATCGCCTGA
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Protein sequence | MSRFTGKKAV VTGGTHGMGL GIVRALAAGG AEVVLTGRDE RKVEQARDQL NIPGVHVVRS DATSAADIDA LGGFVAETLG RVDAVFVNHG VAEFQTLGEL TADSFDKQFA VNTKGAVFTV KRLAPLLRDG GSVTFTTVAN DRIFPGLSGY SGSKEALHAI AKVLAAEFLP RRIRVNSVAP GYIKTPSMGV PGLSDAERAA FEAEGDQTPL GRLGSIEEVA AAALFLGFDA TYTTAAELAV DGGFAQGIA
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