Gene Snas_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1243 
Symbol 
ID8882429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1314907 
End bp1316463 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content70% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003510046 
Protein GI291298768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA ACGAGAAGGC GAGCCCGAGA CAGTGGCTCG GACTGTCGGT GCTGTTGCTG 
CCGACGATGC TGTTGTTCCT GGCGATGACG GTGCTGTTCC TGGCGACGCC GTACATCACC
GCCGACCTGA AACCCAGCGG TCCACAGGTG CTGTGGATAA ACGACATCTA CGGCTTCATC
ATGGCCGGGT TCCTCGTCAC CATGGGGACG CTCGGCGACA AGTTCGGCCG TCGCCGGATC
CTGTTGTCCG GAGCGGCGCT GTTCGGTGCC GCCTCGATCC TGTCGGCCTA CGCCCCCAAC
CCGGACGTGC TCATCGTCGG GCGCGCCCTC ATGGGACTGG GTGCCGCCGC GCTGGTTCCG
GCCACGCTCG CGTTGATCAC CAACACCTTC ACCAACGCGC GGCAGCGGTC TGTCGCCATC
GGGCTGTGGG CCGCGTCGGT CTCGGCCGGG GTGGCGATCG GGCCGCTGGT GGGCGGGCTG
CTGCTGGAGT CGCTGTGGTG GGGCGCCTCG CTGCTGATCG GGGTGCCGGT CATGGCGCTG
GTGCTGGTGA CGGTGCCGCT GTTGATCCCG GAGTACAAGG CCCCCAACGC CGGGCGGCTC
GACCCGTTGA GCGTCGTGCT GTCGCTGGCG GCGCTGCTGC CGTTCGTCTA CGGCGTCAAG
GCGCTGGCCG AGACCGGCCT CGACGCGATC ACGGCGGTGA CGCTGGTGGC CGGTATCGGT
TTGGGCGCGG TGTTCGTCCG CCGTCAGCTG CGGCTGCCGG AACCGCTGAT CGACATGCGG
CTGTTCCGCA ACCGCACCTT CGGTGGCGCG CTGGCCGTCT ACATGTTCGC GACCGTGGCC
CTCGGCGGGG TGTACCTGCT GTTCACGCAG TACCTGCAAC TGGTGGCCGA CCAGTCGCCG
CTGGCGGCGG GACTGTGGAT CCTGCCCGCG GCCATCGCGC TGGTGGTGGT GTCGATCGTG
GCCCCGATCC TGGCCCGTCG GGTGCGTCCG GCGTACCTCA TCGCGGCCGG GCTGCTCGCC
TCGGCGATCG GCTACGTCGT GCTGACGCAG GTGGACAGCA CCGCCGGACT GCCGCTGCTC
ATCACCGGGT TCTACATCCT GTACCCGGGA ATCGCCCCGG CGATGGCGCT GATCCCGGAC
CTGGTCATCA GCTCGGCCCC GCCGGAGAAG GCCGGTGCGG CCTCGGCGGT CGAGGGCACG
ATCAGCGACC TGGGTGTCGC GTTGGGCGTG GCGATCCTGG GCAGCGTCGG CACGACGGCA
TACCGGTCCC ATATGGACAC CGTCGAGGTT CCCGGCGAGG CCGCCGCCGA GTCCGCCGAA
ACCCTGCCGG GGGCGCTGGA CGCGGCACAG AAGCTGCCCG ACGAGGTCGG CGGCACGCTG
GTCGACGCCG CGAAGACGGC GTTCACCGAG GGGCTGAACC TGGCGGCACT GGTGGCCGCG
GTGCTGACGG TCATCGGCGC GGTCGTCGCC GTGACGGTGC TGCGGCGGGG CGAACCCGCC
GAGGCGGCCG ACGAGACCGA AACGGACCCC GACACGGAAC TGGCCGAGGT GGCCTGA
 
Protein sequence
MSANEKASPR QWLGLSVLLL PTMLLFLAMT VLFLATPYIT ADLKPSGPQV LWINDIYGFI 
MAGFLVTMGT LGDKFGRRRI LLSGAALFGA ASILSAYAPN PDVLIVGRAL MGLGAAALVP
ATLALITNTF TNARQRSVAI GLWAASVSAG VAIGPLVGGL LLESLWWGAS LLIGVPVMAL
VLVTVPLLIP EYKAPNAGRL DPLSVVLSLA ALLPFVYGVK ALAETGLDAI TAVTLVAGIG
LGAVFVRRQL RLPEPLIDMR LFRNRTFGGA LAVYMFATVA LGGVYLLFTQ YLQLVADQSP
LAAGLWILPA AIALVVVSIV APILARRVRP AYLIAAGLLA SAIGYVVLTQ VDSTAGLPLL
ITGFYILYPG IAPAMALIPD LVISSAPPEK AGAASAVEGT ISDLGVALGV AILGSVGTTA
YRSHMDTVEV PGEAAAESAE TLPGALDAAQ KLPDEVGGTL VDAAKTAFTE GLNLAALVAA
VLTVIGAVVA VTVLRRGEPA EAADETETDP DTELAEVA