Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1218 |
Symbol | |
ID | 8882404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1291913 |
End bp | 1292425 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | 50S ribosomal protein L17 |
Protein accession | YP_003510021 |
Protein GI | 291298743 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0264415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACAGC CGACCAAGGG CGCCCGCCTG GGTGGTTCTC CGGCGCACCA GCGGCTCATG CTGGCGAACC TGGCGACCTC GCTGTTCAAG CACGGCAAGA TCACCACGAC CGAGGCCAAG GCGCGCAAGC TGCGTCCGTA CGCCGAGCGG CTGGTCACCT TCGCCAAGCG CGGTGACCTC GCCTCCCGTC GCCGGGCCAT CGCGAAGATG ACCGAGAAGG ACGTCACGCA CGAGCTGTTC GACTCGATCG CGTCGCGCTA CACCAACCGC GACGGCGGGT ACACCCGCAT CGTGAAGATC GGTCCCCGCA AGGGCGACAA CGCTCCGATG GCCGTCATCG AGCTGGTCGA GGAACTCGCC GAGGCCCCCA AGCCGAAGCG CAAGCCCGCC ACCCGCAAGG CCGCCAAGGC CGAAGCGGTG GAGGCGCTGG CCGGTGGCGA CGACGAGGCC ACCGACGAGC CGAAGGCTGC CGAAGCCAAG GCCGACGACA GCAAGAAGTC GGACGACGAG TAA
|
Protein sequence | MPQPTKGARL GGSPAHQRLM LANLATSLFK HGKITTTEAK ARKLRPYAER LVTFAKRGDL ASRRRAIAKM TEKDVTHELF DSIASRYTNR DGGYTRIVKI GPRKGDNAPM AVIELVEELA EAPKPKRKPA TRKAAKAEAV EALAGGDDEA TDEPKAAEAK ADDSKKSDDE
|
| |