Gene Snas_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1218 
Symbol 
ID8882404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1291913 
End bp1292425 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content69% 
IMG OID 
Product50S ribosomal protein L17 
Protein accessionYP_003510021 
Protein GI291298743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0264415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACAGC CGACCAAGGG CGCCCGCCTG GGTGGTTCTC CGGCGCACCA GCGGCTCATG 
CTGGCGAACC TGGCGACCTC GCTGTTCAAG CACGGCAAGA TCACCACGAC CGAGGCCAAG
GCGCGCAAGC TGCGTCCGTA CGCCGAGCGG CTGGTCACCT TCGCCAAGCG CGGTGACCTC
GCCTCCCGTC GCCGGGCCAT CGCGAAGATG ACCGAGAAGG ACGTCACGCA CGAGCTGTTC
GACTCGATCG CGTCGCGCTA CACCAACCGC GACGGCGGGT ACACCCGCAT CGTGAAGATC
GGTCCCCGCA AGGGCGACAA CGCTCCGATG GCCGTCATCG AGCTGGTCGA GGAACTCGCC
GAGGCCCCCA AGCCGAAGCG CAAGCCCGCC ACCCGCAAGG CCGCCAAGGC CGAAGCGGTG
GAGGCGCTGG CCGGTGGCGA CGACGAGGCC ACCGACGAGC CGAAGGCTGC CGAAGCCAAG
GCCGACGACA GCAAGAAGTC GGACGACGAG TAA
 
Protein sequence
MPQPTKGARL GGSPAHQRLM LANLATSLFK HGKITTTEAK ARKLRPYAER LVTFAKRGDL 
ASRRRAIAKM TEKDVTHELF DSIASRYTNR DGGYTRIVKI GPRKGDNAPM AVIELVEELA
EAPKPKRKPA TRKAAKAEAV EALAGGDDEA TDEPKAAEAK ADDSKKSDDE