Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1217 |
Symbol | |
ID | 8882403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1290845 |
End bp | 1291882 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_003510020 |
Protein GI | 291298742 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0300236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCATCA CTCAGCGTCC GACTCTCAGC GAAGAGTCGC TCTCGGACAC ACGGTCCCGG TTCTCCATCG AGCCGCTGGA GCCGGGTTTC GGTTACACGC TCGGCAACTC GCTGCGGCGT ACCCTGCTGT CGTCCATTCC GGGCGCGGCG GTCACCTCGA TCAAGATCGA CGGTGTCCTG CACGAGTTCA CCACCATCCC CGGCGCCAAA GAGGACGTCG TGGAGCTGGT GCTCAACGTC AAGCAGCTGT GCGTCAGCTC CGAGCTGGAC GAGCCGGTCA CCATGTACCT GCGCAAGCAG GGCCCCGGCG ACGTCACCGC GGGCGACATT CAGCCGCCGT CGGGCGTCAC CGTCCACAAC CCGGAACTGA AGCTGGCCAC GCTCAACGGC AAGGGCCGCC TCGACATGGA GCTCATCGTC GAGCGGGGCC GCGGTTACGT CTCGGCCGCC CAGAACAAGC AGGCCGGTGC CGGTATCGGC CGGATCCCGG TCGACTCGAT CTACTCGCCC GTGGTGAAGG TCAGCTACCG GGTCGAGGCC ACCCGTGTCG AGCAGCGCAC CGACTTCGAC AAGCTCATCA TCGACGTGGA GACCAAGCCG TCCACCGGCC CGCGCACCGC GCTGGCCTCG GCCGGTTCCA CCCTGGTGGA ACTGTTCGGT CTGTACCGCG AGCTGGACTC CGCCGCCGAG GGCATCGACG TGGGTCCGTC CCCGGCCGAC GCGCAGCTGG CCGCCGATCT GGCGCTGCCG ATCGAGGAGC TGGAGCTGAC CGTCCGGTCG TACAACTGCC TCAAGCGCGA GGGCGTCGAC CAGGTCGGCG AGCTCATCAA CCGCACCGAG GCCGACCTGC TGGACATCCG CAACTTCGGT CAGAAGTCCA TCGACGAGGT CAAGATGAAG CTGGCCGGTC TGGGCCTGGC GCTGAAGGAC TCCCCGGGCA CCTTCGACCC GGCCGAGGCC GCTGCCGCCT ACGACGACGG TGAGTACGAC GAATTCGACG ACGACGGAGA AGAGCTCCGC GAAACCGAAC AGCTGTAG
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Protein sequence | MLITQRPTLS EESLSDTRSR FSIEPLEPGF GYTLGNSLRR TLLSSIPGAA VTSIKIDGVL HEFTTIPGAK EDVVELVLNV KQLCVSSELD EPVTMYLRKQ GPGDVTAGDI QPPSGVTVHN PELKLATLNG KGRLDMELIV ERGRGYVSAA QNKQAGAGIG RIPVDSIYSP VVKVSYRVEA TRVEQRTDFD KLIIDVETKP STGPRTALAS AGSTLVELFG LYRELDSAAE GIDVGPSPAD AQLAADLALP IEELELTVRS YNCLKREGVD QVGELINRTE ADLLDIRNFG QKSIDEVKMK LAGLGLALKD SPGTFDPAEA AAAYDDGEYD EFDDDGEELR ETEQL
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