| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1177 |
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| Symbol | |
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| ID | 8882363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1263760 |
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| End bp | 1267641 |
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| Gene Length | 3882 bp |
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| Protein Length | 1293 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase beta' subunit |
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| Protein accession | YP_003509980 |
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| Protein GI | 291298702 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.4986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0273398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTGACG TCAACTTCTT CGACGAACTG CGCATCGGCC TGGCGACCGC CGAGGACATC
CGCCAGTGGT CCCACGGCGA GGTCAAGAAG CCCGAGACCA TCAACTACCG GACCCTGAAG
CCGGAAAAGG ACGGCCTGTT CTGCGAGAAG ATCTTCGGGC CGACCCGCGA CTGGGAGTGC
TACTGCGGCA AGTACAAGCG CATCCGGTTC AAGGGCATCA TCTGTGAGCG CTGCGGCGTC
GAGGTGACCC GTTCCAAGGT GCGTCGTGAG CGCATGGGCC ACATCGAGCT GGCCGCCGCG
GTCACCCACA TCTGGTACTT CAAGGGCGTT CCCTCCCGGC TGGGCTACCT GCTGGACATC
GCGCCCAAGG ACCTCGAGAA GATCATCTAC TTCGCCGCCT ACGTGATCAC GTCGGTGGAC
TCCGAGGCCC GGCACCGCGA CCTGGCGACC CTGGAGAACG AGATCGCCGC CGAGAAGCGG
CAGATGGAGA ACGGCCGCGA CGCCGAAGTC GAGAAGCGCG CCGCCAAGCT GGAGGCCGAC
CTGGCCGAGC TGGAGGCCGA AGGCGCCAAG GCCGACGTCC GCCGCAAGGT CAAGGACGGC
GGCGAGCGCG AGATGCGCCA GATCCGTGAC AAGGCGCAGC GTGAGATCGA CCGCCTGGAA
GAGGTCATCG ACACCTTCCG CAAGCTGGAG CCCAAGCAGC TCATCGGTGA CGAGATGCTG
TTCCGCGAGC TGCACGACCG GTTCGGGGAG TACTTCACCG GTTCCATGGG CGCCGAGGCC
GTCAAGGAAC TGCTGGCCAA CCTCGACCTC ACCGCCGAGC TGGAGAACCT GCGCGACATC
ATCGCCAACG GCAAGGGTCA GAAGAAGATC CGCGCCCTGA AGCGACTGAA GGTCGTGGCC
CCGTTCGCGA CCAGCGGCTC CAACCCGATG GGCATGGTCC TGGACTGCGT CCCGGTGATC
CCGCCGGAGC TGCGCCCGAT GGTGCAGCTG GACGGTGGCC GCTTCGCCAC CTCCGACCTC
AACGACCTGT ACCGCCGGGT CATCAACCGC AACAACCGGC TCAAGCGACT GATCGACCTG
GGCGCGCCCG AGATCATCGT CGCCAACGAG AAGCGGATGC TGCAGGAGTC GGTGGACGCC
CTGTTCGACA ACGGCCGTCG CGGCCGCCCG GTCACCGGAC CGGGTAACCG CCCGCTGAAG
TCGCTGTCCG ACATGCTGAA GGGCAAGCAG GGCCGGTTCC GTCAGAACCT GCTGGGCAAG
CGCGTCGACT ACTCCGGCCG TTCGGTCATC GTGGTCGGCC CGCAGCTGAA GCTGCACCAG
TGCGGCCTGC CCAAGCAGAT GGCGCTGGAG CTGTTCAAGC CCTTCGTCAT GAAGCGGCTG
GTCGACCTCA ACCACGCCCA GAACATCAAG TCCGCCAAGC GGATGGTGGA GCGGGCCCGC
CCCGCGGTGT GGGACGTCCT GGAAGAGGTC ATCACCGAGC ACCCGGTGCT GCTGAACCGC
GCGCCGACCC TGCACCGGCT GGGCATCCAG GCCTTCGAAC CGCAACTGGT CGAGGGCAAG
GCCATCCAGA TCCACCCGCT GGTGTGCACC GCGTTCAACG CCGACTTCGA CGGTGACCAG
ATGGCGGTCC ACGTGCCGCT GTCCACCGAG TCGCAGGCCG AGGCGCGGAT CCTGATGCTG
TCGGCCAACA ACATCCTCAA GCCGTCCGAC GGCCGTCCGG TCACCATGCC CACGCAGGAC
ATGATCATCG GTCTGTACCA CCTGACCCAC CGTCGCGAGG GACTGCCGGG CGAAGGCCGG
GCGTTCTCCT CGGTGTCGGA GGCGATGATG GCCTACGACC GCGGCGAACT GCACCTGCAG
GCGCCGGTGG CGATCCGGGT CGAGGGCGTT CCGTCCATCG ACACCGGCAA CGGCCCCGAG
CCGGTCGAGG ACGCCGAGTC GACCGCCGCG CTCACCGTGC AGACGACCCT GGGACGGGTC
ATCTTCAACG AGGCGCTGCC GACCGACTAC CGCTTCGTCA ACTACGAGGT CCGCAAGGGC
CAGCTGTCGG AGATCGTCAA CGACCTGGCC GAGCGCTACA CCAAGGTGCA GCTGGGCGCG
TCCCTGGACG CGTTGAAGGC GGCCGGTTTC CACTGGGCCA CCTGGTCGGG CATCACGATC
GGCTACGCCG ACGTCGTCGG GCCCAAGGCC AAGGCGGCCA TCCTGGAGCG GCACGAGAAG
GACGCCGACC GGATCGAGAA GCAGTACCAG CGCGGTCTGA TGACCGCCGA GGAACGCCGC
GGCGAGCTGA TCGAGATCTG GACCAAGGCG ACCAACGAGA TCGCCAAGGA GATGGACACC
GACCTGCCGC AGGAGAACCC GCTGTGGCAG ATGATCAACT CCGGCGCGCG AGGCAACATG
CTGCAGCTGC GGCAGATCGC CGCGATCCGT GGCCTGGTGG CCAACCCGAA GGGTGAGATC
ATCCCGCGCC CCATCAAGTC CTCCTACCGC GAGGGCCTGA CGGTGCTGGA GTACTTCATC
TCCACCCACG GTTCCCGAAA GGGTCTGGCC GACACGGCGC TGCGTACCGC GGACTCCGGT
TACCTGACCC GTCGTCTGGT GGACGTCTCG CAGGACGTCA TCGTCCGCGA GGAGGACTGC
GAGACCGAAC GCGCCGTTCG GATCCCGCTG GCCACCGAGG TGGACGGGCA GTGGGTCGCG
CACGAGAACG CCGAGACCTC GGTGTACGCG CGCACGCTGG CCGAGGACCT CAAGGACGCC
AAGGGCAAGC TGCTGGCGGC CGAGGGCGTC GACCTGACCC AGCCGATCGT CGACATCCTG
GTGGCGGCCG GTGTCAAGGA GGTGCGGGTC CGCAGCGTCC TGACCTGTGA GTCGCAGCTG
GGCGTCTGTG CCGCCTGCTA CGGCCGCTCG ATGCCGACCG GTCAGAAGGT CGACATGGGC
GAGGCCGTCG GCATCATCGC GGCCCAGTCC ATCGGTGAGC CCGGTACCCA GCTGACGATG
CGTACCTTCC ACACCGGTGG TGTGGCCGGG GACGACATCA CGCAGGGTCT GCCGCGTGTC
CAGGAGATCT TCGAAGCGCG TATCCCCAAG GGGAAGGCGC CGATCGCCGA GGCGGCCGGC
ACCGTGCGCA TCGAGGACGC CGACAAGTCC CGCAAGATCA TCATCACGCC GGACGACGGC
ACCGACGAGA TCGTGCTGGA CAAGCTGTCC CGCCGGACCC GGCTGCGGGC CCACGACGGC
GACCACATCG GCGTCGGCGA GAAGCTCACC GAGGGCACCA TCGACCCGCA CGAGCTGTTG
CGGGTGCTGG GTCCGCGTCA GGTGCAGTCG CACCTGGTGG ACCAGGTGCA GGACGTGTAC
CGCTCGCAGG GCGTGCTCAT CCACGACAAG CACATCGAGA TCATCGTCCG CCAGATGCTC
AAGCGGGTCA CGATCATCGA CTCGGGCACG ACGGAGTTCC TGCCCGGCTC GCTGGTCGAC
CGGGTGGTCT TCGAGGGCGA GAACCGTCGC ATCGTGGCCG AGGGCGGCGA GCCGGCCTCC
GGCCGTCCGC AGCTGATGGG TATCACCAAG GCGTCGCTGG CCACCGACTC GTGGCTGAGC
GCGGCCTCCT TCCAGGAGAC CACCAAGGTG CTGACCGACG CGGCGATCAA CGCCAAGTCG
GACTCCCTCA TCGGTCTGAA GGAGAACGTC ATCATCGGAA AGCTCATCCC GGCGGGTACC
GGCATCAGCA AGTACCGCAA CGTCCGGGTC GAGCCCACCG AGGAGGCGAA GTCCCGCGTG
TACTCCATGG GTGGCTACGA GGACCCGGTG CCCGCGTTCG GCTTCGGCGC CCCGTCGTCC
AACGCCGTCC CGCTGGACGA CTTCGACATC GGACAGTTCT AG
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| Protein sequence | MLDVNFFDEL RIGLATAEDI RQWSHGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
YCGKYKRIRF KGIICERCGV EVTRSKVRRE RMGHIELAAA VTHIWYFKGV PSRLGYLLDI
APKDLEKIIY FAAYVITSVD SEARHRDLAT LENEIAAEKR QMENGRDAEV EKRAAKLEAD
LAELEAEGAK ADVRRKVKDG GEREMRQIRD KAQREIDRLE EVIDTFRKLE PKQLIGDEML
FRELHDRFGE YFTGSMGAEA VKELLANLDL TAELENLRDI IANGKGQKKI RALKRLKVVA
PFATSGSNPM GMVLDCVPVI PPELRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLIDL
GAPEIIVANE KRMLQESVDA LFDNGRRGRP VTGPGNRPLK SLSDMLKGKQ GRFRQNLLGK
RVDYSGRSVI VVGPQLKLHQ CGLPKQMALE LFKPFVMKRL VDLNHAQNIK SAKRMVERAR
PAVWDVLEEV ITEHPVLLNR APTLHRLGIQ AFEPQLVEGK AIQIHPLVCT AFNADFDGDQ
MAVHVPLSTE SQAEARILML SANNILKPSD GRPVTMPTQD MIIGLYHLTH RREGLPGEGR
AFSSVSEAMM AYDRGELHLQ APVAIRVEGV PSIDTGNGPE PVEDAESTAA LTVQTTLGRV
IFNEALPTDY RFVNYEVRKG QLSEIVNDLA ERYTKVQLGA SLDALKAAGF HWATWSGITI
GYADVVGPKA KAAILERHEK DADRIEKQYQ RGLMTAEERR GELIEIWTKA TNEIAKEMDT
DLPQENPLWQ MINSGARGNM LQLRQIAAIR GLVANPKGEI IPRPIKSSYR EGLTVLEYFI
STHGSRKGLA DTALRTADSG YLTRRLVDVS QDVIVREEDC ETERAVRIPL ATEVDGQWVA
HENAETSVYA RTLAEDLKDA KGKLLAAEGV DLTQPIVDIL VAAGVKEVRV RSVLTCESQL
GVCAACYGRS MPTGQKVDMG EAVGIIAAQS IGEPGTQLTM RTFHTGGVAG DDITQGLPRV
QEIFEARIPK GKAPIAEAAG TVRIEDADKS RKIIITPDDG TDEIVLDKLS RRTRLRAHDG
DHIGVGEKLT EGTIDPHELL RVLGPRQVQS HLVDQVQDVY RSQGVLIHDK HIEIIVRQML
KRVTIIDSGT TEFLPGSLVD RVVFEGENRR IVAEGGEPAS GRPQLMGITK ASLATDSWLS
AASFQETTKV LTDAAINAKS DSLIGLKENV IIGKLIPAGT GISKYRNVRV EPTEEAKSRV
YSMGGYEDPV PAFGFGAPSS NAVPLDDFDI GQF
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