Gene Snas_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1175 
Symbol 
ID8882361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1259047 
End bp1259817 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509978 
Protein GI291298700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.095468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAT ACGTCCCCCG CAAACTGCGG GATCGCTCCG GCGTGACCCG CTCCAAGACC 
TCCCGGGAAC GCGCGGTCAC GGTCGAGAAG GACGAGGCGC CCAAGAAGTC GTCCAAGACC
ACCCCCAAGT CCGGCGCCAA GCGCCGTCCC TCACCGCGCG GCGGCTCCGC CCCGCGCCGT
CCCTCGCCGA AGTCCCGCTC CTCGCTGGCC GGCTACAAGC GCGAGCCCTG GTCGATCGGT
GAGTGGCGGC ACATGACCAA GCTGCTGTCG CTGATCGCGC TGGCGGCGGT GCTGCTGGCG
GGCGTCACCT GGGTGGGCTC GGGCAATTCG GGGCTGCAAC TGGCCGGGCT GTTCGGCCGC
TCCACCGGTG AGCTTGCCGA CGCCAAGAAG GACGCCCGCA CCGCGGCGGC GGCCATGTTC
TCCTACGACT ACCGCAACTT CGGCGACTCG GTGAAGAACG GTCAGGCGCA CACGACCGGC
TACTTCAGCG AGGAGTACGC CAAGACCACC AAGAAGCTGA AGAAGACCGT GGTCAAGGAG
GAGGCGACCG TCGAGTCGGA GGTCGTGGAC GTGGCGACCG TCGAGGCCGA CGCGACCTGC
TCGCCCAAGA AGGGCCCCAG CTACGACGGC GGCATCGAGT TCCTGGCCTT CGTCAACCAG
ACCACCAAGA ACAAGAACAT CGAGGGCTCC CGGATCGACA AGAGCCGGGT CGTGATGTGC
ATGGTCTACA CCGAATCGGG CTGGAAGACC GCCGACGCGA AGGCGATCTG A
 
Protein sequence
MSGYVPRKLR DRSGVTRSKT SRERAVTVEK DEAPKKSSKT TPKSGAKRRP SPRGGSAPRR 
PSPKSRSSLA GYKREPWSIG EWRHMTKLLS LIALAAVLLA GVTWVGSGNS GLQLAGLFGR
STGELADAKK DARTAAAAMF SYDYRNFGDS VKNGQAHTTG YFSEEYAKTT KKLKKTVVKE
EATVESEVVD VATVEADATC SPKKGPSYDG GIEFLAFVNQ TTKNKNIEGS RIDKSRVVMC
MVYTESGWKT ADAKAI