Gene Snas_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1174 
Symbol 
ID8882360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1258457 
End bp1259050 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509977 
Protein GI291298699 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.147447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATCGA AACAAGGGAA ACTGCTCGGC GCGAAGAGCA CCTGGCAGGC CCTGAACGTC 
ATCCTGCTCG TGATCACCCT GGGCGGGTTG GCCGGAGGCG TGTGGTTCGG GTTCAAATGG
TTCGACGGCG CCCGGGTGGG CAGCTCCCAG ACCGACCCGG TCGACGCGGC CCGCGAGGTC
GTCACCAAGA TCCTGACGGT GTCGCCCGGG ACCGTGGACG AGAACCTGGC CGACGTCGAG
GAGCTCGCGA CCGGCGACTT CGCCGACGAG TGGATCGAGG GCGAGAAGAC CGTCAAGAAG
TCGGTGCAGG AGTCGGGCGC GACCCGCAAG CCCGACATCC TCAAGGCCGG TTACCTCAAG
GGCGACTCGG ACTCGGCGAC CGTGATCCTG GCCGCCGACA CCCGCACCAC CTTCAAGAAC
AAGATCGACG ACTCCAAGGA CAAGGGCAAG AAGAAGGACG ACAAGAAGAA ACAGGACGGC
GACAAGGACG GCGACGGCAT CCCCGACCCG CGCACCGACC ACTTCCGGAT CAAGGTCAAC
ATGGCCCTCG TCGACGGCAC CTGGAAGATC GCGAAGATGG AGATGGCGCA ATGA
 
Protein sequence
MKSKQGKLLG AKSTWQALNV ILLVITLGGL AGGVWFGFKW FDGARVGSSQ TDPVDAAREV 
VTKILTVSPG TVDENLADVE ELATGDFADE WIEGEKTVKK SVQESGATRK PDILKAGYLK
GDSDSATVIL AADTRTTFKN KIDDSKDKGK KKDDKKKQDG DKDGDGIPDP RTDHFRIKVN
MALVDGTWKI AKMEMAQ