| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1173 |
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| Symbol | |
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| ID | 8882359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1257162 |
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| End bp | 1258460 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_003509976 |
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| Protein GI | 291298698 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.376131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCTCCC GGAAGCTGCG GCTCCAGATC GGCGTCTTCG CCCTGATCTC GCTGCTGGGC
ATCGCGTTCG TCGGGGTGCG CTACCTCGGC TGGTTCGACT CGTCCTATGT GGTCTACGTG
GACGCCAAGG AGACCGGCGG CGCCTACGAG CACGCCGCCG TGGCCTACCG CGGCGTGCCG
ATCGGCCGGG TCGGCGAGGT CAAGCTGCAC GGCAAGGGCG CCCGGATGGA ACTGCGGATC
GACTCCGAGA CCAAGGTGCC CAAGGACGTC AAGGCCGTGG TCGCGCAGCG CTCGGCCGTC
GGCGAACAGT ACGTGGACCT GCGCCCCAAC ACCGCCGAGG GCCCGTACCT GGGCGAGGGC
GACGTCGTGG ACGACGTGGC CACCCCGCTG CCGATGGAGC AGCTGCTGGC GAATCTGGAC
GGCCTGCTGG AAAGCGTCGA CCCCGACGAC CTGAAGGTCG TCATCGACGA ACTGGGCGCC
GCCTTCGAGG GCAACGAGGA ATCGCTGGAC AAGATGCTCG ACGCCACCCA GACCCTCATC
GACGACGCCG CCGAGCACCT GCCCGAGACC GTCGACCTGC TCAAGGACGG CAAGACCGTC
CTGGAGACCC AGGACGACTC GGCCTCGGCG ATCCGCACCT GGGCCGACAA GCTGTCGGAA
CTGACCACGA CGGTCAAGAA GTCGGACAAG GACATCCGCA AGCTGCTCGA CGTCGGCCCC
GAGGCCGCCG ACGAGGTCTC CGGGCTGATC CACGACCTGG ACCCGAACCT GGGCACCCTG
CTGGGCAACA TGATCTCGGT CAACGGCGTG GCCGTGCAGC GGCTGCCCAA CATCGAGGAG
GTGCTGGTCA CCTACCCGAT GGTGATCTCC GGCGGCTCCA CCGTGACCCC CGGCGACGGC
ACCGCGCACT TCGGGCTGGT CCTCAACTTC GACAACCCGC CGCCGTGCGT CTACGGCGAG
GGCAACGACG GCTACGAGTG CACCGCGGGC GAACAGGGCG AGGGTTCGGC CGTGCGCGGC
TGGCAGCACG CCCCCGGCGC CACCGGCCCG GCCATCGAGC CGGTGCCGCT GCCCGAGAGC
GGCGCGTCCA AGGACGGCGA CTCCGACGAC GACGGCGAGG GCACCGCGCA AGGTGGCGAC
GCCGATACCG AGTCGAGTCG ATACGGTTAC GACCCCTTGA CCGGATTGTT GGTCGACAGT
GACGGTATGC CGATACAGTT CGGCAGCACC GGTGGCCAGT ACGAACTGGC CGGCGAGGAG
TCGTGGAAAT CCCTGCTGTT GACCGGAGTG ATGTCTTGA
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| Protein sequence | MISRKLRLQI GVFALISLLG IAFVGVRYLG WFDSSYVVYV DAKETGGAYE HAAVAYRGVP
IGRVGEVKLH GKGARMELRI DSETKVPKDV KAVVAQRSAV GEQYVDLRPN TAEGPYLGEG
DVVDDVATPL PMEQLLANLD GLLESVDPDD LKVVIDELGA AFEGNEESLD KMLDATQTLI
DDAAEHLPET VDLLKDGKTV LETQDDSASA IRTWADKLSE LTTTVKKSDK DIRKLLDVGP
EAADEVSGLI HDLDPNLGTL LGNMISVNGV AVQRLPNIEE VLVTYPMVIS GGSTVTPGDG
TAHFGLVLNF DNPPPCVYGE GNDGYECTAG EQGEGSAVRG WQHAPGATGP AIEPVPLPES
GASKDGDSDD DGEGTAQGGD ADTESSRYGY DPLTGLLVDS DGMPIQFGST GGQYELAGEE
SWKSLLLTGV MS
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