Gene Snas_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1146 
Symbol 
ID8882332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1227521 
End bp1227955 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content69% 
IMG OID 
ProductRoadblock/LC7 family protein 
Protein accessionYP_003509949 
Protein GI291298671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.410023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATA ATGCGCCCGC CGGGCAGCCT TCTGACCTGA CCTGGCTATT GACCAGCCTG 
ATCGAACGGG TGCCGCACAC CAACAGCGCC CTGTTGCTGT CGTCCGACGG CCTCAAGAAG
GCCTTCCACG GTTTGAGCGC CGACCAGGCC GACCACCTGG CGGCCATCGC CTCGGGGCTG
TTCTCGCTGG CCCGCAGTGC CGGCAGCCGG TTCGGCGACA GTGGATCGGT GCGGCAGGTG
GTCGCCGAAC TCGACCAGAC CCTGTTGTTC GTCTCGGCCG CGGGATCCGG CGCCGTCCTG
GCGGTGCTGG CCTCGCGCGA CGCCGACGCC GGTGTGCTCG GCTACGAGAT GGTGCAACTG
GTCAAGAGTG TCCGGCCCTA CCTCGCCACC CCGGCCCGGC ACGCGGTGGC GACCCCGGGT
GACGCGGTGC GGTGA
 
Protein sequence
MLNNAPAGQP SDLTWLLTSL IERVPHTNSA LLLSSDGLKK AFHGLSADQA DHLAAIASGL 
FSLARSAGSR FGDSGSVRQV VAELDQTLLF VSAAGSGAVL AVLASRDADA GVLGYEMVQL
VKSVRPYLAT PARHAVATPG DAVR