Gene Snas_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1145 
Symbol 
ID8882331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1225475 
End bp1227487 
Gene Length2013 bp 
Protein Length670 aa 
Translation table11 
GC content72% 
IMG OID 
ProductATP-binding region ATPase domain-containing protein 
Protein accessionYP_003509948 
Protein GI291298670 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAC TCCCCCCAAC TACCGCGCGT AACGTTCCAC CGGACGACTC CAGACGGACC 
GGTTACGGTG TCAGTGGGGC ATCCATTGAC GACAAACTCC GTTCACGTCT CATGTGGAAT
GCCGTGCTGC CGCCGCTGGT GATCACCCTG GCCGCGGCCG GCGCGTTCTG GTATCTGCTG
TCGGCCCCTG CGCCCGTTAC CACTTCGACA CGGGTCTTGG TGCTGTGCGT CGCCGGGGTC
ATCGCCCTGA TCGCGATCCT GTGGTCGGTG GCCCGAGCCT CCTCGGTCTC GTTCGAGGCC
CACGGCGACC TGACCGAGAT CCGCGCCATG ATCCCGCGCG GTCCCGAGGA CCTGCAGGCC
GCCGTCGAAC GCTGGCAGCG CGGCGAGCGG CCGCACCTGC CCGACCCGCC CTCCCACGAC
GCCGGTGAAC TGCCGCTGTT GGCCTACGAG CTGGACCGGT TCCGCACCGA GGCCGTGGAC
GCGGTCGTGC GGGCCACCAC CACCTCGGCG GTGAACGGGG CGCCCCCCGG CGGCGTCGAC
GTGCGCGTCG GCGTGTTCGT CAACCTGGCG CGGCGGCTCC AGTCCCTGGT GCACCGCGAG
ATCCAGCTCC TGGACGACCT GGAGGCCCAG GTCGAGGACC CCGACCTCCT CAAGGGACTG
TTCGCGGTCG ACCACCTCGC CACCCGGATC CGGCGCCACG CCGAGAACCT GGCCGTCCTG
GGCGGCGCGG TCTCCAGCCG CCAGTGGAGC AAGCCGGTCA ACATGTACGT CGTGCTGCGT
TCGGCGGTCG CCGAGGTCGA GCAGTACGCC CGCGTCAAGC TGGTCCGCCC CATCGAGGGC
ACCCTCAAGG GCCACGCGGT CGCCGACGTC ATCCACCTGG TCGCCGAGCT GGTCGAGAAC
GCCACCAGCT TCTCCAACCC CAACACCCAG GTCCTGCTGC GGGCCCAGCG CGTCACCGCG
GGCATCGCCC TGGAGGTCGA GGACCGCGGG CTGGGCATGC CGCGCGAGGA CCAGCACCGG
CTCAACAGCA TGCTGTCCTC CCCGGACCAG GTCGACGTCG CCGAACTGCT CAACGACGGC
CGCATCGGCC TGTTCGTCGT GTCCACCCTG GCCCGGCGCC ACGGCGTCGC GGTGCAGTTG
CAGACCAATA TCTACGGCGG TATCCAGGCG GTCATCGTGC TGCCGCACGA CATGCTCGGC
GATGCCGGGC AGCCGAAGCT GGAGCAGCAG CCCGCCCAGC AGCCGCAGCC GGAACCGCCC
GCGCAGCTGG AACAGCGACA GGTGTCGGCA CCGCCGATGC CGCCGCGCAT CCCCGAGGAG
GTCCCCAGCG CTCCGGCAGC CGCCCCGGCC CCGGCCGCGC CCACGGCCCC CTCGCCCGCC
CCGGCTCCCA CACCCGCTTC GACACCTCCG GTCGCGCCGA CGAGCCCCGC CCCGGTTCCG
AGCCTGTCGA CCGAGCCGCC CCGCCCCACC CGCCGGCCGC TGCCCTACGC GGGCCGCAAC
ACCGGCGCGG GTGGCGCGGC GAGCGTCTCG CCCGACCCGC GACCGACCTC CGAACGTCCG
CCGTCACCGG CCATGACCTC CGCGACCGAG CCGGTGTCCC CGGCCGCCCT CGCCGAGTCG
CCGGTGCGGC AGCGGCCGCC GTCCTCGCTG GACGATCCGT CGGCCGGATC AGGATTCGTG
TCGGTTGGTG GGCCGCCACG GTTGTTCGAA CCAGGCAATC CCAACGAAAC CACCGGGGTG
ATTCACATGG GACCGATTCC GCCCGAGGAG GAGTCCACGC CGGACTCCGC CGGTGCGGCG
CCCGACGCCG ACCGCAAACC GGACGACCGG CCCCGACTGC CACAGCGACG CCGGCAGACT
CACCTGGTAC CAGAACTTCG CGAGGTCGCC GCGCCACGCA ACGAGCAACT ATCCGAGCAC
GACCCGGGCC TGATGATGGC CTTCCAGAAG GGCGTCAATC GCGCCGCACC CGAGGCAGAG
GACGCCGACG GCCGCTTCGA CGGCGCTAGT TAA
 
Protein sequence
MSQLPPTTAR NVPPDDSRRT GYGVSGASID DKLRSRLMWN AVLPPLVITL AAAGAFWYLL 
SAPAPVTTST RVLVLCVAGV IALIAILWSV ARASSVSFEA HGDLTEIRAM IPRGPEDLQA
AVERWQRGER PHLPDPPSHD AGELPLLAYE LDRFRTEAVD AVVRATTTSA VNGAPPGGVD
VRVGVFVNLA RRLQSLVHRE IQLLDDLEAQ VEDPDLLKGL FAVDHLATRI RRHAENLAVL
GGAVSSRQWS KPVNMYVVLR SAVAEVEQYA RVKLVRPIEG TLKGHAVADV IHLVAELVEN
ATSFSNPNTQ VLLRAQRVTA GIALEVEDRG LGMPREDQHR LNSMLSSPDQ VDVAELLNDG
RIGLFVVSTL ARRHGVAVQL QTNIYGGIQA VIVLPHDMLG DAGQPKLEQQ PAQQPQPEPP
AQLEQRQVSA PPMPPRIPEE VPSAPAAAPA PAAPTAPSPA PAPTPASTPP VAPTSPAPVP
SLSTEPPRPT RRPLPYAGRN TGAGGAASVS PDPRPTSERP PSPAMTSATE PVSPAALAES
PVRQRPPSSL DDPSAGSGFV SVGGPPRLFE PGNPNETTGV IHMGPIPPEE ESTPDSAGAA
PDADRKPDDR PRLPQRRRQT HLVPELREVA APRNEQLSEH DPGLMMAFQK GVNRAAPEAE
DADGRFDGAS