Gene Snas_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1132 
Symbol 
ID8882318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1209299 
End bp1210201 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509935 
Protein GI291298657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0290503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCGC CCGCGTATGC CGAGGACGAG GTCCACAAGC TGGAGAAGAA GCTCGAGAAA 
GCCGCCGAGG CGTACAAGGA CGCCAAGAAG GACCTCAAGG ACGCCGAGAA GAAGCAGAAG
AAGCTGAAGA AGGACATCAA GGACGGCGAG AAGAAGGTCG AGGAGCTCAC CGACGAGATC
AACGACTTCG CTCAGGCCGC CTACCTCAGC GGTGGGCTGC CGACCGCCAC GGCCATCCTG
ACGTCCGGCT CCCCGCAGGA AGCCGTGCGC AGCCTCTCCA CCATGAGCTT CCTGGGTGAG
GACGCCGCCG ACGAGCTCGA GGACTTCCTC GCCGCGGCGG AGGAACTCGA GGCCGACAAG
GACGCCCTCG ACGACGAGAT CGAAAAGGCC AAGAAGGCCG TCAAGAAAAA GAAGAAGGCA
CAGGACAGCC TCAAGGACCA GATCGACGAG ATCAACGGCG GTCCGTCCAA CGGCAGCGGC
GGCGCGGCTG GGCAGGGCCC CGGCGGTGGC GGCAGCTGTT CCGAGACCGA CCCCACCGGC
ACCGGCGGCT GTGTCACCCC GACGCTGCTG CACGCCTACA ACGAGGCCCA GGACGCCGGA
TACACCCGTT ACACGAAGTG CTTCCGCAAC CAGGACTCCG GCGAACACGG CAAGGGACGC
GCCTGCGACT TCGCCGCGTC CGAGGGCGGC TTCGGCTCCG ACGCCACCGG CGGCGACCAG
ACCTACGGCG ACAACCTCGC CGGATGGTTC GTCAACAACG CCGACGCACT GGGCGTCTAC
TACGTCATCT GGGACAATCA GATCTGGATG GAGGGCACCG GCTGGGGTAA CTACTCCAGT
GGTCACACCG GTAATCCGTC CCAGGATCAC ACCGACCACG TCCATCTTTC GGTGAACTTA
TGA
 
Protein sequence
MSSPAYAEDE VHKLEKKLEK AAEAYKDAKK DLKDAEKKQK KLKKDIKDGE KKVEELTDEI 
NDFAQAAYLS GGLPTATAIL TSGSPQEAVR SLSTMSFLGE DAADELEDFL AAAEELEADK
DALDDEIEKA KKAVKKKKKA QDSLKDQIDE INGGPSNGSG GAAGQGPGGG GSCSETDPTG
TGGCVTPTLL HAYNEAQDAG YTRYTKCFRN QDSGEHGKGR ACDFAASEGG FGSDATGGDQ
TYGDNLAGWF VNNADALGVY YVIWDNQIWM EGTGWGNYSS GHTGNPSQDH TDHVHLSVNL