Gene Snas_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1130 
Symbol 
ID8882316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1205806 
End bp1206615 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509933 
Protein GI291298655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.485024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0063751 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGTACC CCGCCCTGAT CGACCGCCTC ACCGCCGCTT TCAGCGCCGA GCCAAGGGTT 
CTGGGTGTTT TCCTCATCGG CAGCCGCGGT CGCGGCACCG CCGACGACCA CAGCGACGTC
GACCTGCTCC TGTGCGCCGA ACCCGAGCAC CACACTGGAC TGTGCGACGA CATGCCACAG
CTGGTCGCCG AGGCCACCGA GACCGTCCAC TCGCAACGCG TCGGCACCCT CCCGGTCTTC
ACCTACATCG CCGCTGGCTG GCTGCGCTTC GACATCTCCG TCGCCAGCCC CGCCGAGCTC
ATGCTCCGCG CTCCCGAGAA TCTCACCGTC CTGTTCGACC GCACCTCGCT CACCGAAACG
ATCACCGGCA CGCCGGTCCC GGTGGAACCC GACGCGGCCA CGGTCGAGGC GATGACCCGC
GAGTTCCTGC GCGTCCTGGG CCTGCTCCCC GTCGTCCTGG GCCGCGGCGA ACACGCCCTC
GGCGTGGCCG GATTCGGCCT CCTGCACGGC ATGCTGGTCC AGGCTCTCCG CCTCACCGCC
CGCGTCGTCG ACCCCGGCGG CGTGCTGAGC CTCAAACACC TCATCCCCGA GGACGTCTAC
CAACGCCTGG AAGAGATCCC CGCCGTCGAA GCCGAACCGG CGTCCCTCAT CGACGCCCAC
CTGGCCTGCG CGCGCCTGTT CCTGCCCACG GCCCACCGTC TCCACGAGAA GACCGGCGCC
GACTGGCCCA CGGCCATGGC CGAAGCCCTC GAAACCCACC TGCGCAAGAC GGTCGACGAA
CGCTTCGCCG CCCTCACCAC CTGGCGCTGA
 
Protein sequence
MKYPALIDRL TAAFSAEPRV LGVFLIGSRG RGTADDHSDV DLLLCAEPEH HTGLCDDMPQ 
LVAEATETVH SQRVGTLPVF TYIAAGWLRF DISVASPAEL MLRAPENLTV LFDRTSLTET
ITGTPVPVEP DAATVEAMTR EFLRVLGLLP VVLGRGEHAL GVAGFGLLHG MLVQALRLTA
RVVDPGGVLS LKHLIPEDVY QRLEEIPAVE AEPASLIDAH LACARLFLPT AHRLHEKTGA
DWPTAMAEAL ETHLRKTVDE RFAALTTWR