Gene Snas_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1125 
Symbol 
ID8882311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1198367 
End bp1199167 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content65% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003509928 
Protein GI291298650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.13168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0632249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCTCAA CACCCATCCT CGAAGTATCC GGGCTCAACA AGAGTTTCGG CCCGGTACAG 
GTACTGCACG ACGTCCACCT GTCCGTCCAC GCCGGTCAGG TCACCGCCCT GGTCGGCGAC
AACGGCGCCG GGAAGTCGAC ACTCATCAAA TGCGTCAGCG GCATCCACGG CATCGACTCC
GGAACCATCC ACTTCGATGA GGAACAGGTC CGGATCGCCT CCCCGCGCGA CGCCGCCAAC
CTCGGCATCG AAGTGGTCTA CCAGGACCTG GCGCTGTGCG ACAACCTGGA CATCGTCCAG
AACATGTTCC TGGGACGCGA GAAACGCTCC GGACTCGTCC TGGATGAGCC CACCATGGAG
CAACTCGCGG CCGAGACCCT GGAAACCCTG GCGGTCAGGA CGGTGAAGTC GTTGCGGCAG
CATGTGTCCA GCCTGTCGGG TGGCCAGCGG CAGACCGTGG CCATCGCCAA GGCGGTGCTG
TGGAACTCCA AAGTGGTGAT ACTGGACGAG CCGACCGCCG CGCTGGGCGT CGCCCAGACC
GCGCAGGTGC TGGAACTGGT GCGCCGGCTC GCCGACAACG GACTGGCCGT GGTGCTGATC
TCCCACAACC TCAACGACGT CTTCGCCGTC TCCGACCGCA TCGCCGCGCT CTACCTGGGA
CAGATGGTCG CCGAGATGGA GACCGCCGAG GTCACCAACA CCCAGGTCGT GGAGCTGATC
ACCTCCGGCT CAAGCGGCGA TCTGGGTCTG CCCCGCGCCG ACTCCTCCAC CGAATACGGA
CTGAACGGAG CCCAGCTGTG A
 
Protein sequence
MSSTPILEVS GLNKSFGPVQ VLHDVHLSVH AGQVTALVGD NGAGKSTLIK CVSGIHGIDS 
GTIHFDEEQV RIASPRDAAN LGIEVVYQDL ALCDNLDIVQ NMFLGREKRS GLVLDEPTME
QLAAETLETL AVRTVKSLRQ HVSSLSGGQR QTVAIAKAVL WNSKVVILDE PTAALGVAQT
AQVLELVRRL ADNGLAVVLI SHNLNDVFAV SDRIAALYLG QMVAEMETAE VTNTQVVELI
TSGSSGDLGL PRADSSTEYG LNGAQL