Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1125 |
Symbol | |
ID | 8882311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 1198367 |
End bp | 1199167 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003509928 |
Protein GI | 291298650 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.13168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0632249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCTCAA CACCCATCCT CGAAGTATCC GGGCTCAACA AGAGTTTCGG CCCGGTACAG GTACTGCACG ACGTCCACCT GTCCGTCCAC GCCGGTCAGG TCACCGCCCT GGTCGGCGAC AACGGCGCCG GGAAGTCGAC ACTCATCAAA TGCGTCAGCG GCATCCACGG CATCGACTCC GGAACCATCC ACTTCGATGA GGAACAGGTC CGGATCGCCT CCCCGCGCGA CGCCGCCAAC CTCGGCATCG AAGTGGTCTA CCAGGACCTG GCGCTGTGCG ACAACCTGGA CATCGTCCAG AACATGTTCC TGGGACGCGA GAAACGCTCC GGACTCGTCC TGGATGAGCC CACCATGGAG CAACTCGCGG CCGAGACCCT GGAAACCCTG GCGGTCAGGA CGGTGAAGTC GTTGCGGCAG CATGTGTCCA GCCTGTCGGG TGGCCAGCGG CAGACCGTGG CCATCGCCAA GGCGGTGCTG TGGAACTCCA AAGTGGTGAT ACTGGACGAG CCGACCGCCG CGCTGGGCGT CGCCCAGACC GCGCAGGTGC TGGAACTGGT GCGCCGGCTC GCCGACAACG GACTGGCCGT GGTGCTGATC TCCCACAACC TCAACGACGT CTTCGCCGTC TCCGACCGCA TCGCCGCGCT CTACCTGGGA CAGATGGTCG CCGAGATGGA GACCGCCGAG GTCACCAACA CCCAGGTCGT GGAGCTGATC ACCTCCGGCT CAAGCGGCGA TCTGGGTCTG CCCCGCGCCG ACTCCTCCAC CGAATACGGA CTGAACGGAG CCCAGCTGTG A
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Protein sequence | MSSTPILEVS GLNKSFGPVQ VLHDVHLSVH AGQVTALVGD NGAGKSTLIK CVSGIHGIDS GTIHFDEEQV RIASPRDAAN LGIEVVYQDL ALCDNLDIVQ NMFLGREKRS GLVLDEPTME QLAAETLETL AVRTVKSLRQ HVSSLSGGQR QTVAIAKAVL WNSKVVILDE PTAALGVAQT AQVLELVRRL ADNGLAVVLI SHNLNDVFAV SDRIAALYLG QMVAEMETAE VTNTQVVELI TSGSSGDLGL PRADSSTEYG LNGAQL
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