Gene Snas_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1118 
Symbol 
ID8882303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1190225 
End bp1190752 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content67% 
IMG OID 
ProductRNA polymerase sigma-24 subunit, ECF subfamily 
Protein accessionYP_003509921 
Protein GI291298643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.973248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCATG ACAGGGCGGA TTCCGAGTTC CGCGACTTCG TGGCGTCCCG ACTCGACCGG 
CTGCGACGGT TGGCGTTCTT GATGTGCGGT GACATGCACC GCGCCGAGGA CGCCGTCCAA
CTCGCGCTGG CGAAGCTGTA CGCCGTGTGG TTTCGGGTCG AACCCGACAG CCTCGACGCC
TACGTGCGTC GCATCGTCAT CAACACCGTC AAGACCCAGT ACTCGCGGCT GTGGACCAAA
CGGGAGCACT GCACCAGTGC CACCCCCGAG CGGGCCGCCG GGGACAGCAA CGCTCGCACC
GCGGATCGGG TGGCGATCCT GGAGGCGTTG GCGCGGCTGC CCCGTCGGCA GCGCGCGGTG
GTGGTGCTGC GGTTTTGGGA GGACCGGTCG GTGGCCGAGA CCGCCGAGAT CATGCGCTGC
TCGCAGGGAG CCGTGAAGAG TCACACGTCG CGGGGGCTGG GAAAGCTGCG GGATCTGCTG
TCCGATACGT ACTCGTTGGA GGGGATGGTC GTGCCATGCC GGACCTGA
 
Protein sequence
MDHDRADSEF RDFVASRLDR LRRLAFLMCG DMHRAEDAVQ LALAKLYAVW FRVEPDSLDA 
YVRRIVINTV KTQYSRLWTK REHCTSATPE RAAGDSNART ADRVAILEAL ARLPRRQRAV
VVLRFWEDRS VAETAEIMRC SQGAVKSHTS RGLGKLRDLL SDTYSLEGMV VPCRT