Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1118 |
Symbol | |
ID | 8882303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1190225 |
End bp | 1190752 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | RNA polymerase sigma-24 subunit, ECF subfamily |
Protein accession | YP_003509921 |
Protein GI | 291298643 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.973248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCATG ACAGGGCGGA TTCCGAGTTC CGCGACTTCG TGGCGTCCCG ACTCGACCGG CTGCGACGGT TGGCGTTCTT GATGTGCGGT GACATGCACC GCGCCGAGGA CGCCGTCCAA CTCGCGCTGG CGAAGCTGTA CGCCGTGTGG TTTCGGGTCG AACCCGACAG CCTCGACGCC TACGTGCGTC GCATCGTCAT CAACACCGTC AAGACCCAGT ACTCGCGGCT GTGGACCAAA CGGGAGCACT GCACCAGTGC CACCCCCGAG CGGGCCGCCG GGGACAGCAA CGCTCGCACC GCGGATCGGG TGGCGATCCT GGAGGCGTTG GCGCGGCTGC CCCGTCGGCA GCGCGCGGTG GTGGTGCTGC GGTTTTGGGA GGACCGGTCG GTGGCCGAGA CCGCCGAGAT CATGCGCTGC TCGCAGGGAG CCGTGAAGAG TCACACGTCG CGGGGGCTGG GAAAGCTGCG GGATCTGCTG TCCGATACGT ACTCGTTGGA GGGGATGGTC GTGCCATGCC GGACCTGA
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Protein sequence | MDHDRADSEF RDFVASRLDR LRRLAFLMCG DMHRAEDAVQ LALAKLYAVW FRVEPDSLDA YVRRIVINTV KTQYSRLWTK REHCTSATPE RAAGDSNART ADRVAILEAL ARLPRRQRAV VVLRFWEDRS VAETAEIMRC SQGAVKSHTS RGLGKLRDLL SDTYSLEGMV VPCRT
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