Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1116 |
Symbol | |
ID | 8882301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 1188270 |
End bp | 1189634 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003509919 |
Protein GI | 291298641 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCTG AGAATGGTGC CGACGTGGAG GCCCAGATCG CTGAGTGGCG GGCGTACATG TTGCGGCGCC GGGCGATCCA TGACACCGAT GTGGACGAAC TGGAGGACCA TCTGCGGGGG CGGATCACCG ATCTGAGTGA GACGGGGCTG CGACCCGACG AGGCGTTTCT CATCGCCGTG AAGCGGATGG GCAGCCTCAA CGAGTTGTCG CGGGAGTTCG CCCGCGAGCA TTCGGATCGG TTGTGGAAGC AGCTGGTGCT GGCCGGGGAG CCCGAGGCCG AGAAGGGGGG CGGACGGCGC GAGCTGTTGG CCATGATCGC GTGCGCGCTG CTCGGGGCGA TCGCGATCAA GGTGCCGTCC GTGTTCGGGC TGGACTTCGA CGCGGACGCG GACTTCTACG CGCGCAACAT GAGCCTGTTC GCTTTGCCGC CGCTGGCCGC GTACTTCGTG TGGCGGCGCC GGGCCGGGTG GGGCGTGATC GCGGTGCTGG CGGGACTGTT CGTCCTGGGC GCCGTGGGGG CGAACGCGTA TCCGTTGGCC GAGGAGGATC AGAGCATCGT GCTGACGGCG ATCCACCTGC CGCTGGCGCT GTGGCTCGTG GTCGCTGTCG CCTACGCGGG CGGGGACTGG CGTTCGGACA GCAGGCGGAT GGACTTCATC CGGTTCACCG GCGAGTGGTT CATCTACTTC GTCCTGATCG GACTCGGCGG CGGAGTGCTG GCCGCGTTCA CGGCGGGGAC CTTCGCCGCG ATCGGGCTCG ACGCCTCGAA CTTCATCGCG TCATGGCTGG TGCCGTGTGG CGGGATGGCC GCGGTCGTCG TGGCCGCGTG GCTGGTGGAG GCCAAGCAGA GCGTCATCGA GAACATGGCG CCGGTGCTCA CCCGCGTGTT CACGCCGCTG TTCGCGGCGA CCATTGTGGC CGTTCTGGCC GCGATCGTGT GGACCAACAG CGGCATCGAC GTGGATCGGG AGGTGCTGAT CCTGTTCAAC CTGCTGCTGG TCGTCGTGCT GGGGCTGCTG CTGTACTCGA TCTCGGCGCG GGATCCACAT GCGCCGGCCG GGGTCTTCGA CTGGCTCCAA CTGGCCCTTG TGGGCAGTGC GCTCGTCGTG GACGTCCTGG TGTTGCTGGC GATCACCGGC CGCATCACCG AGTTCGGTTT CACGCCCAAC AAGAGCGCGG CCCTGGGCGA GAACGTCATC CTGTTCGCCA ACCTGGCCGT CTCGGCCTGG CTGTTCCTGG GGATCGCCAA GGGCCGGACG CCGTTCCCGC GCCTGGAGCG CTGGCAGACC GGTTACGTCG CCGTGTACGC GGTGTGGGCG TGGATCGTCG TGCTCGTGTT CCCGCCGGTG TTCGGTTTCG CGTAA
|
Protein sequence | MTAENGADVE AQIAEWRAYM LRRRAIHDTD VDELEDHLRG RITDLSETGL RPDEAFLIAV KRMGSLNELS REFAREHSDR LWKQLVLAGE PEAEKGGGRR ELLAMIACAL LGAIAIKVPS VFGLDFDADA DFYARNMSLF ALPPLAAYFV WRRRAGWGVI AVLAGLFVLG AVGANAYPLA EEDQSIVLTA IHLPLALWLV VAVAYAGGDW RSDSRRMDFI RFTGEWFIYF VLIGLGGGVL AAFTAGTFAA IGLDASNFIA SWLVPCGGMA AVVVAAWLVE AKQSVIENMA PVLTRVFTPL FAATIVAVLA AIVWTNSGID VDREVLILFN LLLVVVLGLL LYSISARDPH APAGVFDWLQ LALVGSALVV DVLVLLAITG RITEFGFTPN KSAALGENVI LFANLAVSAW LFLGIAKGRT PFPRLERWQT GYVAVYAVWA WIVVLVFPPV FGFA
|
| |