Gene Snas_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1116 
Symbol 
ID8882301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1188270 
End bp1189634 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509919 
Protein GI291298641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG AGAATGGTGC CGACGTGGAG GCCCAGATCG CTGAGTGGCG GGCGTACATG 
TTGCGGCGCC GGGCGATCCA TGACACCGAT GTGGACGAAC TGGAGGACCA TCTGCGGGGG
CGGATCACCG ATCTGAGTGA GACGGGGCTG CGACCCGACG AGGCGTTTCT CATCGCCGTG
AAGCGGATGG GCAGCCTCAA CGAGTTGTCG CGGGAGTTCG CCCGCGAGCA TTCGGATCGG
TTGTGGAAGC AGCTGGTGCT GGCCGGGGAG CCCGAGGCCG AGAAGGGGGG CGGACGGCGC
GAGCTGTTGG CCATGATCGC GTGCGCGCTG CTCGGGGCGA TCGCGATCAA GGTGCCGTCC
GTGTTCGGGC TGGACTTCGA CGCGGACGCG GACTTCTACG CGCGCAACAT GAGCCTGTTC
GCTTTGCCGC CGCTGGCCGC GTACTTCGTG TGGCGGCGCC GGGCCGGGTG GGGCGTGATC
GCGGTGCTGG CGGGACTGTT CGTCCTGGGC GCCGTGGGGG CGAACGCGTA TCCGTTGGCC
GAGGAGGATC AGAGCATCGT GCTGACGGCG ATCCACCTGC CGCTGGCGCT GTGGCTCGTG
GTCGCTGTCG CCTACGCGGG CGGGGACTGG CGTTCGGACA GCAGGCGGAT GGACTTCATC
CGGTTCACCG GCGAGTGGTT CATCTACTTC GTCCTGATCG GACTCGGCGG CGGAGTGCTG
GCCGCGTTCA CGGCGGGGAC CTTCGCCGCG ATCGGGCTCG ACGCCTCGAA CTTCATCGCG
TCATGGCTGG TGCCGTGTGG CGGGATGGCC GCGGTCGTCG TGGCCGCGTG GCTGGTGGAG
GCCAAGCAGA GCGTCATCGA GAACATGGCG CCGGTGCTCA CCCGCGTGTT CACGCCGCTG
TTCGCGGCGA CCATTGTGGC CGTTCTGGCC GCGATCGTGT GGACCAACAG CGGCATCGAC
GTGGATCGGG AGGTGCTGAT CCTGTTCAAC CTGCTGCTGG TCGTCGTGCT GGGGCTGCTG
CTGTACTCGA TCTCGGCGCG GGATCCACAT GCGCCGGCCG GGGTCTTCGA CTGGCTCCAA
CTGGCCCTTG TGGGCAGTGC GCTCGTCGTG GACGTCCTGG TGTTGCTGGC GATCACCGGC
CGCATCACCG AGTTCGGTTT CACGCCCAAC AAGAGCGCGG CCCTGGGCGA GAACGTCATC
CTGTTCGCCA ACCTGGCCGT CTCGGCCTGG CTGTTCCTGG GGATCGCCAA GGGCCGGACG
CCGTTCCCGC GCCTGGAGCG CTGGCAGACC GGTTACGTCG CCGTGTACGC GGTGTGGGCG
TGGATCGTCG TGCTCGTGTT CCCGCCGGTG TTCGGTTTCG CGTAA
 
Protein sequence
MTAENGADVE AQIAEWRAYM LRRRAIHDTD VDELEDHLRG RITDLSETGL RPDEAFLIAV 
KRMGSLNELS REFAREHSDR LWKQLVLAGE PEAEKGGGRR ELLAMIACAL LGAIAIKVPS
VFGLDFDADA DFYARNMSLF ALPPLAAYFV WRRRAGWGVI AVLAGLFVLG AVGANAYPLA
EEDQSIVLTA IHLPLALWLV VAVAYAGGDW RSDSRRMDFI RFTGEWFIYF VLIGLGGGVL
AAFTAGTFAA IGLDASNFIA SWLVPCGGMA AVVVAAWLVE AKQSVIENMA PVLTRVFTPL
FAATIVAVLA AIVWTNSGID VDREVLILFN LLLVVVLGLL LYSISARDPH APAGVFDWLQ
LALVGSALVV DVLVLLAITG RITEFGFTPN KSAALGENVI LFANLAVSAW LFLGIAKGRT
PFPRLERWQT GYVAVYAVWA WIVVLVFPPV FGFA