Gene Snas_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1109 
Symbol 
ID8882294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1178382 
End bp1180463 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509912 
Protein GI291298634 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTACA GGTCGGCGGC GTTCTGGCCC GGAACCCACC AGCCGGCGCC CAGACCGCCG 
CCGACCGTCC TAAAGTTCGG ATATTCTGGC CCCTTGAACA CGACGCCGGA ACCCGAGTAC
GCGATACCCG CCACCGTGGC GGCCCCGCTG CCCCACCGGC CGCCCCCCAA GGGGCTGGGC
AAATGGCTGC TCAAGCACCA GGTCCACCCC GCCGGGCCGG TCAGCGACAA GACCGACGGC
CACAAGCCGC AGTCGTGGTG GAAGGTCATG TGCCTCACCG GCGTCGACTA CTTCTCCACG
CTGTCGTATC TGCCCGGAAT CGCGGTGCTG GCCGCCGGTG CGCTGTCGCC GCTGGCCACA
CTGTTGATCG TCGCGCTGAC GCTGCTGGGC ATGCTGCCGA TGTACCGCCG CGTCGCCCGG
GAGAGCCCGC ACGGCCAGGG CTCGGTGGCG ATGCTGGAAA ACCTGCTGCC GTTCTGGCGC
GGCAAGATGT TCGTGTTGGC GCTGTTGGGT TTCGTCGCGA CGTCGTGGAT CGTCACCATC
ACTCTGTCGT CGGCCGACGC GACGGTGCAC GTGCTGGAGA ACCCGTACGC GCCCGAGTTC
CTGCACGGCC AGGCGGTGCT GCTGACCGTG GTGCTGCTCT TGGTCCTGGG CGGCATCTTC
CTGCTCGGCT TCAACGAGGC CGTCGGCGTG GCGATCCCGC TGGTGGCGGT GTTCCTGCTG
CTCAACGCCG CCGTCGTGGC CGCCGGGCTG TTCGACGTGC TAAGCCACCC CGAGTCCATG
TCCCGCTGGG TGGAGGCACT CACCACGCAC GGCACCGGTT TCCTCGACAT CGCCGGGCCC
GCGGTGCTGG CGTTCCCGCT GCTGGTGCTG GGCATGTCCG GCTTCGAGAC CGGGGTGTCG
ATGATGCCGT TGGTCAAAGC CGAGGGCGAG ACGCACGAGC GGCGGCTGGA GTCGCGCATC
CGCAACACCC GCAAGCTGTT GACCACTGCG GCGCTCATCA TGTCGGTGTA CCTGCTGGCG
ACGAGCTTCA TCACCACCGT CCTGATCCCG AAGAAGGAGT TCGAGGAGGG CGGCAAGGCC
AGCGGCCGGG CGCTGGCATA CCTGGCGCAC CAGGAACTGG GCGAGTTCGT CGGCACCGCC
TACGACATCT CCAGCGTGCT GATCCTGTGG TTCGCGGGCG CCTCGGCGAT GGCGGGCCTG
ATCAACATCG TGCCCCGCTA CCTGCCCAAG TACGGCATGT CACCGCAGTG GGGACAGGCG
GTGCGTCCGG TCGTGTTGGT GTACACCGTG ATCAGCATCG GCATCACGAT CGCCTTCGGC
GCCGACGTCA ACGCGCAGGC CGGGGCGTAC GCGACCGGGA TCCTGGCGAT GATGGCCTCC
GGCGCGGTGG CCGTGACCAT CTCGGCGGCC AAGGGCCGAC AGCTGTACGC GGGCATCGGT
TTCGCGGTGC TGACGCTGGT GCTGTTGTAC GCGCTGGTGG AGAACATCAT CGAGAAGCCG
GACGGCATCG CGATCTCGGC GGCGTTCATC GGCGGCATCA TCGTGGTCTC GCTGATCTCG
CGGGTCACCC GCACCACCGA ACTGCGCGCC GACCACATCG AGTTCGACGA GACCGCCCGT
ACCTTCATCA CCGACACGCT CGCCCACGAC GGCGCGATCA ACATCATCGC GAACAAGCGC
CAGGCCGGGG ATCTGAACGA GTACGCCGAG AAGGAGGCCG AGCAGCGGGG TCTCAACCCG
GTGCCCGGTG CCGCCGACGT CCTCTTCCTG GAGGTCGAGG TCATCGACCC GTCGAGCTTC
AGCGACGTGC TGCGGGTGTG CGGCGTCGAG AAGGACGGCC ACCGCATCCT GCGGGTGCAG
AGCCCGGCGG TGCCCAACGC GATCGCCGCG ATCCTGCTGG CGCTGCGCGA CGCGACCGGC
GTCAAGCCGC ACTGCTACTT CGAGTGGTCG GAGGGCAGCC CGGTGGGGCA CCTGCTGCGG
TTCCTGATGC TGGGACAGGG CGACGTGCCG CCGATGGTGC GAGAGGTGCT GCGCACCAGC
GAACCCGAGA AGGCGCGGCG ACCGGGCATC CACGTGGGCT GA
 
Protein sequence
MGYRSAAFWP GTHQPAPRPP PTVLKFGYSG PLNTTPEPEY AIPATVAAPL PHRPPPKGLG 
KWLLKHQVHP AGPVSDKTDG HKPQSWWKVM CLTGVDYFST LSYLPGIAVL AAGALSPLAT
LLIVALTLLG MLPMYRRVAR ESPHGQGSVA MLENLLPFWR GKMFVLALLG FVATSWIVTI
TLSSADATVH VLENPYAPEF LHGQAVLLTV VLLLVLGGIF LLGFNEAVGV AIPLVAVFLL
LNAAVVAAGL FDVLSHPESM SRWVEALTTH GTGFLDIAGP AVLAFPLLVL GMSGFETGVS
MMPLVKAEGE THERRLESRI RNTRKLLTTA ALIMSVYLLA TSFITTVLIP KKEFEEGGKA
SGRALAYLAH QELGEFVGTA YDISSVLILW FAGASAMAGL INIVPRYLPK YGMSPQWGQA
VRPVVLVYTV ISIGITIAFG ADVNAQAGAY ATGILAMMAS GAVAVTISAA KGRQLYAGIG
FAVLTLVLLY ALVENIIEKP DGIAISAAFI GGIIVVSLIS RVTRTTELRA DHIEFDETAR
TFITDTLAHD GAINIIANKR QAGDLNEYAE KEAEQRGLNP VPGAADVLFL EVEVIDPSSF
SDVLRVCGVE KDGHRILRVQ SPAVPNAIAA ILLALRDATG VKPHCYFEWS EGSPVGHLLR
FLMLGQGDVP PMVREVLRTS EPEKARRPGI HVG