Gene Snas_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1106 
Symbol 
ID8882291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1176194 
End bp1177075 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509909 
Protein GI291298631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGATCA TCGCGGTACA ACCGCTGCTG GTGGGAGCGG TCCTGTTGTG GGCCGCCAAC 
GTGAAGCTGT TCAGCCGACG CGGCGCGATC GCCGCCCGGG ACGCGGCGCT GGCGCGGCTG
GTCGGCGAGA AGCGGGCGCC CGCGGCGTAC CGGATCCTCG GCGCCGCCGA GGCGGTCGTG
GGACTGGCGC TGCTGGTCCC GATCCTTTGG GCCCCGGCCA CCGTGGCGGC CATCGCGCTG
TCGGCGGGAT TCTGCGGGTA CCTCGCCTAC GCGCGCGTCG CCGCGCCCGA ATCGTCCTGC
GGTTGCCTGG GCGGCAAGGG TGCTGCGATC TCGTGGCGCG CCTTCGCCCG CAGCGGCGGC
ATGCTGGCCG CGTCCGTCAC GATACTGTGG ACGGACATGG CGTGGCCGAC GGCGCTCGCC
CAGCACCCCG CGTCGTCGCT CGGCGTCGTC GCCGTCGAGG CCGCGCTGTT CCTGACGGTG
TCGGCCGAGT TCGACGGCGC CTGGCTGGTT CCGTTGCGGC GGTGGCGAGC CCGCTGGTCC
CGGCCGCTGG GCGGCGACAC CGGCGAGGTG CCGCTGGACG CGACCGTCGA GCGGATGCAA
CGCTCCGACG TCTTTCGCCA CGTCGCGAAA CTGCTGCGCA GCGACGTCCG CGAGACCTGG
GACGAGGACG ACTGGCGGAT CGTCTGCTAT GGAGCGATGG TCGACGGACG CCGGGCCACG
GCGGTGTTCG CGGTTCCGTT GCTGCGCGAC GCCCCCGACG AGGTGCGGGT CGCGTTCGTC
GATGACAAGA CCTCACAGAC CTTGCTGCAC TTCAACTCCC CGCCCGAGGA GGACGAACGG
CCTGAGTGGG CGATGCCGAA GTCAGCGACG ATGGCCGGTT GA
 
Protein sequence
MSIIAVQPLL VGAVLLWAAN VKLFSRRGAI AARDAALARL VGEKRAPAAY RILGAAEAVV 
GLALLVPILW APATVAAIAL SAGFCGYLAY ARVAAPESSC GCLGGKGAAI SWRAFARSGG
MLAASVTILW TDMAWPTALA QHPASSLGVV AVEAALFLTV SAEFDGAWLV PLRRWRARWS
RPLGGDTGEV PLDATVERMQ RSDVFRHVAK LLRSDVRETW DEDDWRIVCY GAMVDGRRAT
AVFAVPLLRD APDEVRVAFV DDKTSQTLLH FNSPPEEDER PEWAMPKSAT MAG