Gene Snas_1095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1095 
Symbol 
ID8882280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1164546 
End bp1166636 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509898 
Protein GI291298620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.534792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCATCG CCGAGCCCGC CAAGCGCGCG GGTAAGTCCC TTTTGGCCTG GGACCCCAGT 
GCGGCTCAGC CCGCCCGTGC CCTCAAGGCC GGGCTCGGCG TCGCGGTGAC GCTGTCGATC
GCGATCGCAC TGGGCTCGCC GGACTGGACC GGGGCCGCGG TACTGGGCAC CTGGTGCGCC
GGGATCCCGT TGCTGGCCGC CGGAGTCCGG CCGCAGCCCG CGCTGCCCGC CCTGGCCGGG
CTGGCCATCG GCGTCGCCGT CACCCTGGGC GGGCTGGCCG AACCGAACCC GGTCGCGGTA
CTGGTGCTGT CGGCCGGTTG GGCCCTGGTG ATGGCATTCC TGGGTTCGCT GTCCAGCGCC
CTGGGCGTGG TGACGACGGT GTGCGGTGTC GCGCTGGTGC TGGGCCCCAA CCTGGTGTCC
GGCGACAACT ACGTCGCCGC CGGGGCCGCG GCGCTGGCCG GTGGCCTGGT GCAGTCGCTG
ACGTCGCTGC TGCCGCCGTG GCAACGGTTC CGCACCGAAC GCTCCCTCAT CGCCGAGGCG
TACCGGTCGC TGGCCGACGA CGCCCGCGCC CTCGCCGACG CCATGAACAC ACCACTGTCG
ACGGACGATC TGGTGCAGGC CAGCTCCGAG ATCGGCGGCC GCCGCAAGCT GCCCGAGGTG
ATGCGCGAGA GCATCGCCGC CCTGTACGAG CTGCGCGCCG CGATCGTGTC GGTGGCCGCC
GCCCGGGCCC GGCTGCTGGA CACCGACCCC ACCGCTGCCC GGCACACCGC CGCCGTCCTG
CGCGACACCG CCAGCGCCAT GGACATCCTG GCCGACGCGG TCGAGAACCT GGAGTCGCTG
TCGGAGGACT GGGAGGACCG GCTGGCCGCC GCCGTGGACG CCGCCCCCGT CGACCAGACC
AACCACGGCG CCACCGCCCG CCACTCGATG GCCGGGCGCG AGGTGCGCCG ACTCCACCGG
GCCGTCCACA AGGTGGCCCG GCTGAGCGAA CGCATCATCG AGGACGAACC CGCCACCAGC
GTCGTGTCGC GCCGCATCCG GATCCGCAGC CGCGCCGCCG AGGACTGGCA GTCGCTGCGT
TCCCAGCTGA CCTGGCGCTC CCCCGCCGCC CGGCACGCCG TGCGCGCCTG CGTCGTCATC
GCGATCGCCA CCGCCGTGGG CCGGTACTGG CCCGGCACCC ACGGCTACTG GGTGACGCTG
ACGGCCTGGA TCGTCCTCAA ACCCGACTTC GCCGCCACCG TCGGCCGGGG CCTGGCCCGG
ATCCTCGGCA CCGCCGCCGG GGTGTTCCTG GCCTCGCTGC TGTCGATCGC GGTGCTGTCG
TACCCGTCGG CGGCGGCCCC GATCGTCGCC GGCTACGCGC TGCTGGGCTA CCTGACCCTG
CCGGTGTCCA ACGTGGTCTA CAGCGTCGCG GTGGCGGGTT TCTCGGTGTT CCAGATCGAC
CTGGCCGGGC AGTCGGCGAT CGAGGCGGCC TGGGAACGCG GCATCACCAC CGTCGTGGGC
GGTCTGCTGG CGCTGCTGTT GTACACGCTG TGGCCGACCT GGCAGACCCG CCGACTCCCG
GAACTGCTGG CCGAACTCAT CGACGCCTAC CGGGGCTACG CCGATCTGGT GCTCGACATG
CAGGCCCGCC CCGCCGAACG CGACCCCCGG CGACTGCGCG ACGCCGTCGA CGAGGTGCGA
CTGCGCCGCG CCGCACTGGC GGCGGCCGTC GACCAGGCCG CCGCCGAACC CGTCGGCGGC
AAACCGCACA GCGGCGACGT CCAGGACGTC GAGGTGGCCC TGTCACGGGC GGCGCGCGCC
CTCATCGTCC TGGAGGGAGC GGTACGGCAC CACGACGCGG CCCAGCTGTT CGGGGTCGAC
GAGTTCCGCG ACTCGGTGCA GCGCGCCTAC GACTGCCTGG CCGACCGGGT CCGCGGCAGA
CAGCCACGGC CGGTCGACCT GCGCGCGGCG CTGGAGTCCC TGGACGCCGC CCTGGACAAG
GGAACCCCGG CCACCATCCG CCGACGGCGG CTGCTCGACT GGGAGTCCGA CATCCTCGTG
GAGGCACTGT CGGACGCCGA CCTGATCGTC AAGGAGTGGC AACGCGCCTA G
 
Protein sequence
MIIAEPAKRA GKSLLAWDPS AAQPARALKA GLGVAVTLSI AIALGSPDWT GAAVLGTWCA 
GIPLLAAGVR PQPALPALAG LAIGVAVTLG GLAEPNPVAV LVLSAGWALV MAFLGSLSSA
LGVVTTVCGV ALVLGPNLVS GDNYVAAGAA ALAGGLVQSL TSLLPPWQRF RTERSLIAEA
YRSLADDARA LADAMNTPLS TDDLVQASSE IGGRRKLPEV MRESIAALYE LRAAIVSVAA
ARARLLDTDP TAARHTAAVL RDTASAMDIL ADAVENLESL SEDWEDRLAA AVDAAPVDQT
NHGATARHSM AGREVRRLHR AVHKVARLSE RIIEDEPATS VVSRRIRIRS RAAEDWQSLR
SQLTWRSPAA RHAVRACVVI AIATAVGRYW PGTHGYWVTL TAWIVLKPDF AATVGRGLAR
ILGTAAGVFL ASLLSIAVLS YPSAAAPIVA GYALLGYLTL PVSNVVYSVA VAGFSVFQID
LAGQSAIEAA WERGITTVVG GLLALLLYTL WPTWQTRRLP ELLAELIDAY RGYADLVLDM
QARPAERDPR RLRDAVDEVR LRRAALAAAV DQAAAEPVGG KPHSGDVQDV EVALSRAARA
LIVLEGAVRH HDAAQLFGVD EFRDSVQRAY DCLADRVRGR QPRPVDLRAA LESLDAALDK
GTPATIRRRR LLDWESDILV EALSDADLIV KEWQRA