Gene Snas_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1080 
Symbol 
ID8882265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1147150 
End bp1147662 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509883 
Protein GI291298605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACAG TCGTCGACCG CCTGCAACGC ATGACGCTCA ACCTGACCTC CCCCGACGGA 
AACCTCTGCG CCACCGTCGA CGCCGAACGC CGTGCCCGGT TCCACCTCCG CGACGAGACG
CGCTTCGAGC GCTACGACGC ACCAACACTG TCCACACAGG TCAAGGCGCT GCTCACCACC
ATGAACTCCG GACGCGAACT GGGCATCAAA CGGGCCTACG CCGCCGACGG CCGTGAACCC
GCCGCCGTCA ACGGCACCCA CTGGGACGCC GCCCACCGCC GCTTCGAAGC AGCTCTGGCC
ACATTGGAAC TCGAAGGCTA CTCCGAGGAC GGACTCCTGC TCCTGCAGTC CGGCTTCGAC
CTGTCCGGCT ACCGGGTCAC CATCGACCGC GACGACCTCC CCCGCACGTC ACCCGAACAG
TTCCTCCGGG AACTGTCCGG CGCCTACCGC GACCTGCTGG CCCACCGCCG CCAGCGACGG
GCCGAACTGC TGCGCGAACA CCTAGGCACC TGA
 
Protein sequence
MSTVVDRLQR MTLNLTSPDG NLCATVDAER RARFHLRDET RFERYDAPTL STQVKALLTT 
MNSGRELGIK RAYAADGREP AAVNGTHWDA AHRRFEAALA TLELEGYSED GLLLLQSGFD
LSGYRVTIDR DDLPRTSPEQ FLRELSGAYR DLLAHRRQRR AELLREHLGT