Gene Snas_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1068 
Symbol 
ID8882253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1135153 
End bp1136346 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content70% 
IMG OID 
ProductColicin V production protein 
Protein accessionYP_003509871 
Protein GI291298593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGGCG GCATTCTGGT TGACATCGTC ATCGTGCTGC TCGCGTTGTT GTTCGCGATC 
AACGGTTACC GGCAGGGGTT CATCATCGGG GCGCTCGGCT TCGCCGGGTT CTTCGGCGGC
GCGCTGATCG GCGTCCAGAT CGCCCCGCTG CTGGTGGAGG TCTCCGAGGC TCCCGCCGCC
CGGGTCCTGA TCGCGCTGCT GGTCGTGTTC GGCATCGCGA TGCTGGGCCA GTGGGGTGGA
TCCGCGCTGG GGGTGCGGCT GCGCAAGCGG GTCAAGAACG ACAACGCCAA ACGCTTCGAC
GAGTTCGGCG GCGCCCTGGT GTCGATGGTG GCGGTGCTGC TGGTGGCCTG GGTGGTCGCC
GCGCCGCTGG CCTCGTCCGG GATGCCGGGC CTCGCCGCGG CGGTGCGCAA CAGCGCGATC
GTGCGCACCA TCGACGAGAA CATGCCCGGC CCGGCGCAGA ACGTCTACAA CGCGCTGCGC
TCGGCGGTCA ACACCAACGG TTTCCCGGAG GTGTTCTCCG GACTCGACCC CAGCGATTCG
CCCCCTGTGG ACCCACCAGA TCCCGAACTG GCCAACTCGA AGGTGGTCCG CGACGCCGAG
GCGTCGGTGC TGCGGGTGTC GGGCGACGCG CCGCAGTGCG ACCGGCACAT CGAGGGATCG
AGCTTCGTCT ACGACGCCGA CCGGGATCTG GTGCTGACCA ACGCACACGT GGTGGCGGGC
ACCGAGTCGG TGAGCGTCGC CGGCGCCGAC GGCGACGTCG AGGCGCGGGT GGTGGTCTTC
GACGACCGGC GCGACCTGGC GGTGCTGTAC GCGCCCGGCC TCAACGCCCC GGAACTGGAC
ACCCTGGACG AGGCCGCCGA GTCCGGCGCC GACACCATTG TGCTGGGTTA CCCGCAGGGC
GGTCCCTACA CCGCCACCGC CTCCCGGGTC CGGGAACACC GCGAGGTCAC CGGCCCCGAC
ATCTACGACT CCGGCGAGGT CACCCGCGAG GTGTACTCGC TGCGGTCCCA GGTGCGCAGC
GGCAACTCCG GCGGTCCGCT GATCTCGGCC GACGGCGACG TCTACGGCGT CATCTTCGCC
GCCGCCGTCG ACGACCCCGA CACCGGTTAC GCCGTCACGA TGGACGAGGC CCGGCCGATC
ATGGAGGAAG GCCAGACCAC CACCGAATCG GTGAGCACCA AGGGTTGTAC CTAG
 
Protein sequence
MQGGILVDIV IVLLALLFAI NGYRQGFIIG ALGFAGFFGG ALIGVQIAPL LVEVSEAPAA 
RVLIALLVVF GIAMLGQWGG SALGVRLRKR VKNDNAKRFD EFGGALVSMV AVLLVAWVVA
APLASSGMPG LAAAVRNSAI VRTIDENMPG PAQNVYNALR SAVNTNGFPE VFSGLDPSDS
PPVDPPDPEL ANSKVVRDAE ASVLRVSGDA PQCDRHIEGS SFVYDADRDL VLTNAHVVAG
TESVSVAGAD GDVEARVVVF DDRRDLAVLY APGLNAPELD TLDEAAESGA DTIVLGYPQG
GPYTATASRV REHREVTGPD IYDSGEVTRE VYSLRSQVRS GNSGGPLISA DGDVYGVIFA
AAVDDPDTGY AVTMDEARPI MEEGQTTTES VSTKGCT