| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1056 |
|---|
| Symbol | |
|---|
| ID | 8882241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 1120912 |
|---|
| End bp | 1123029 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | Peptidoglycan glycosyltransferase |
|---|
| Protein accession | YP_003509859 |
|---|
| Protein GI | 291298581 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGCC TCTTCGCCGG GGTGGTGGTC GCCGCCTCGG CATTTCCCTC TCTCGCGGTC
GTGGGTTTGA CCGCCAAGGC AAGTTCCGAC GGCTTCGAAG GGTTGCCTAC CGAATTGCAG
GACCCTCCGG CGCCGCAGAC GAGCTGGCTG TACGCCAATG ACGGGGAAAC CTTGATCACT
TCCTTTTACG ACGAGAGCCG TAAAGAGGTC GACCTCGACG ACATCGCACC TGTGATGCAG
AAGGCGATAA TCGCCGCCGA AGACAACCGC TTCTATGAAC ACAACGGCGT AGACCTGGTT
GGGGTTATTC GTGCGGGCGT GGCAAATCAG GGCGGCGGCG AGGTTTCCCA GGGCGCATCG
ACTCTGACCA TGCAATACGT CCGACAGGCT CTGACGTACA ACGCGAAAAC TAATCAGGAT
GTGTTGGAGG CCACCGAAGA CACGCCGCAA CGCAAACTCC GCGAGATGCG CTACGCCGCC
GCGGTGGAGA AGCAGTACTC CAAGAAGGAG ATCCTCGAGC GGTACCTGAA CCTGGTGTTC
CTCGGGAACC AGTCGTACGG GGTCTACGCG GCCTCCCAGG CGTACTTCAG CAAGGATCCG
TCGGAGCTGG AGCTCCAAGA GGCGGCGATG CTGGCCGCGC TGCCCAAGGC GCCGGGCACC
ATCGACCCGT CGCTGGGCGA GAAGGAGAAC AAGAAGGCCA AGGAGCGCCG CAACTACGTG
CTGGACCGGA TGGTCAAGAC CAAGGCCATC AGCAAGAAGC AGGCCGACAA GGCCAAGAAG
ACCGACCTGG ACCTCAAGCC GAGCAACCAG CCCTCGGACT GCACCGCGGT GCCGCAGGAC
CGCAAGGACT GGGGTTTCTT CTGTGACTTC TTCAAGGACT GGTGGATGAA CAACCCCCAG
TTCGGGTCCA CCAAGGACGA ACGCCTGAAC AACCTCAAGA CCGGCGGCTA CGTCATCAAG
ACCACGCTGG ACCCGGATCT GCAGGAGAAG GCGCAGAAGG AGGTCACCAA GCGCCAGAAG
AAGGACTCGT CCTGGGCGCT GGGCGACGTG ACCCTGGATC CCAAGACCGG CAGTGTCAAG
TCGATGGCGA TCAACCGCGA CTTCAGTCTC GACATCTCCA AGAACGGCCC CAACTCGGGC
GGTTCGGGCA AGGGCACCTA TCCGGCCACG ACGGTGCCGT TGCTGTCGGG CGGTTCGGGC
AAGGCGGGCG CCGGTTTCCA GGCCGGTTCG ACGTTCAAGA TGTTCACGAT GCTGGCCGCC
CTCAAACAGG GCAAGTCGCT GAAGACGACC TACGACAATC CCAAGGGCGA CTATCCGTCC
AAGATCTACG GGGTCGGCTA CAACCCGACG GAGTCCTCGT GCGGCAAACG CAACGCCGAC
GGCCAGTACG CCTGGTGTCC CGGCAACGAC AATCCCAAGT GGATGGCGGG CAAGGCCGAC
ATGTACCGGG GCTTCGGACG CTCGGTCAAC ACCTATTTCG TCCAGCTGTT GGAGGACGTG
GGTGCCGAGA ACGCCGTGGA CATGGCCAAG TCGCTGGGAA TCGACCTGCG CGGCAAGGGC
GACCAGGAGA ACGACGAGAA CCCCCGCAAG AAGCACCTGT GGGGTTCCTT CACCCTGGGG
GTGTCCGACA CGACGGTGAT GGACGTCGCC GAGGCGTACG GGACAGTGGC CAACGACGGC
ATCCACTGCG ATCCACTGCC GGTGAAATCG ATGACGGACT CCAAGGGCAA CAAGGTCGAC
GCCAAACCCG AGTGCGAGAG GGTGATCTCA TCCGACGTGG CCCGGGCCGC CGCCGACGCC
GCCAGGTGTC CGGTCGGCGA CCAGGCCCAG TCAGGCAAGT GCCAGGACGG CACCTTCCGC
GACGGACACA AGATCGTCGG CCGTCCCATG GCGGGCAAGA CCGGTACCAC GCAGAGCAAC
CAGGCGTCCT GGTTCGTCGG CATGACCCCC AACATCGTGT CGGCCGGGTT CATCGCCGAC
CCGGACGTCC GCTCCAAGTC GCTGCCGCAG AGTTACCACA ATCTGCCGCA CGAGGCGGTG
TCACACACGA TGAAGGCGGC CCTGGAGGGC GAGCCGGTCG AGAACTTCAA GAAACCCACC
GGCAAGCTGG TGGGTTAG
|
|---|
| Protein sequence | MCGLFAGVVV AASAFPSLAV VGLTAKASSD GFEGLPTELQ DPPAPQTSWL YANDGETLIT
SFYDESRKEV DLDDIAPVMQ KAIIAAEDNR FYEHNGVDLV GVIRAGVANQ GGGEVSQGAS
TLTMQYVRQA LTYNAKTNQD VLEATEDTPQ RKLREMRYAA AVEKQYSKKE ILERYLNLVF
LGNQSYGVYA ASQAYFSKDP SELELQEAAM LAALPKAPGT IDPSLGEKEN KKAKERRNYV
LDRMVKTKAI SKKQADKAKK TDLDLKPSNQ PSDCTAVPQD RKDWGFFCDF FKDWWMNNPQ
FGSTKDERLN NLKTGGYVIK TTLDPDLQEK AQKEVTKRQK KDSSWALGDV TLDPKTGSVK
SMAINRDFSL DISKNGPNSG GSGKGTYPAT TVPLLSGGSG KAGAGFQAGS TFKMFTMLAA
LKQGKSLKTT YDNPKGDYPS KIYGVGYNPT ESSCGKRNAD GQYAWCPGND NPKWMAGKAD
MYRGFGRSVN TYFVQLLEDV GAENAVDMAK SLGIDLRGKG DQENDENPRK KHLWGSFTLG
VSDTTVMDVA EAYGTVANDG IHCDPLPVKS MTDSKGNKVD AKPECERVIS SDVARAAADA
ARCPVGDQAQ SGKCQDGTFR DGHKIVGRPM AGKTGTTQSN QASWFVGMTP NIVSAGFIAD
PDVRSKSLPQ SYHNLPHEAV SHTMKAALEG EPVENFKKPT GKLVG
|
|---|
| |