Gene Snas_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1025 
Symbol 
ID8882210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1085679 
End bp1086272 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509828 
Protein GI291298550 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.579242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0008545 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGACT ACGACGACCC GACCGCCACC GAAGAAGAAG ACACCACCAC GGAAGAGGAC 
ACCTCGACCG AGGACGACGC GGCCGCCGAC GACAGCGGCC TGGTGGACAT CAACGGTGAC
GGCGTCTACG ACGAGGGCAT GGAGACCGAC GACGGCACCG CCTACGACAC CAACAACGAC
GGTGTCGCCG ACGCGCTGGT GACCGATGAC GGCTCGCTGC TGATGGACTC CGACGGCAAT
GGCATCTACG ACACCCAGAT GACTGATGCC GACGGTAACG GCGTCTACGA CACCGCCGAG
ATGGACCTGA ACGAGGACGG CGTGGTTGAC CAGGTCGCCA CCGACGCGGA CGGTGACGGC
GACAACGCGA TCGACACGGT CCAGACCGAC ACCGACGGTG ACGGCACCAT GGACACCACC
GTTCAGGACA CGAACCTGGA CGGCGTGGCT GACACCACGA CCATCGACGC TGACGCTGAC
GGCACCCCGG AGTCGACCTT CACCGACTCC AACGCCGACG GTGTGGCCGA CGACGTGACC
TACGAAGACA AGGAAGTCGA CGCGGGTCCG GGTCTGGGCG GACAGTCCAG CTAA
 
Protein sequence
MNDYDDPTAT EEEDTTTEED TSTEDDAAAD DSGLVDINGD GVYDEGMETD DGTAYDTNND 
GVADALVTDD GSLLMDSDGN GIYDTQMTDA DGNGVYDTAE MDLNEDGVVD QVATDADGDG
DNAIDTVQTD TDGDGTMDTT VQDTNLDGVA DTTTIDADAD GTPESTFTDS NADGVADDVT
YEDKEVDAGP GLGGQSS