Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1016 |
Symbol | |
ID | 8882201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 1078111 |
End bp | 1079211 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Citrate (Si)-synthase |
Protein accession | YP_003509819 |
Protein GI | 291298541 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.525155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00235766 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGAAT TCAAGCCAGG TCTCGAAGGC GTAGTCGCCT TCGAGACGGA GATCGCCGAA CCCGACAAGC AGGGCGGCTC GCTGCGATAT CGCGGTGTCG ACATCGAGGA TCTCATCGGC CACGCCTCCT ACGGCCACGT GTGGGGCCTT CTCGTGGACG GCGCCTTCGG GCCGGGCCTG CCCCCGGCCG AGCCGTTCCC GGTTCCGGTG CACACCGGGG ACATCCGCGT CGACGTCCAG TCGGCCGTGG CCATGCTGGC CCCCTACTGG GGCCTGGGCC AGCTGCTGGA CATCAGCGAC GAGCAGGCCC GCGAGGACCT GGCGCGGGTA TCGGTGACCG CGCTGTCCTA TGTGGCGCAG TCGGCGCGCG GGGTGGGTCG GCCCGCGGTG CCGCAGAAGG AGATCGACAA ATCCGACACC ATCGTGGAAC GCTTCATGCG CCGCTGGCGC GGCGAGCCTG ACCCCCGGCA TGTCAAGGCC GTCGACGCGT ACTTCATCTC CGCCGCCGAG CACGGCATGA ACGCCTCCAC CTTCACCGCC CGCGTCGTCG CCTCCACCGG CGCCGACGTG GCCGCCTGCA TCTCCTCCGG CATCGGCGCC CTGTCCGGCC CGCTGCACGG CGGCGCGCCC TCCCGGGTCC TGCACATGCT CGAGGAGGTC GAGCGCACCG GCGACGCCAA GACCTACGTC AAGGGCGTGC TGGACCGCGG CGAGCGGCTG ATGGGCTTCG GGCACCGGGT CTACCGGGCC GAGGATCCGC GGGCGCGGGT GCTGCGCCGC ACCGCCAAGG AACTGGGTTC GGAGCGTTAC GAGGTCGCCG AGGCGCTGGA GAAGGCGGCG CTGGCGGAAC TGAAGGAACG CAAGCCCGAC CGGGTGCTGG CCACCAATGT GGAGTTCTGG TCCGCGGTGG TGCTGGACTT CGCGCAGGTG CCCGCCGACA TGTTCACGTC GATGTTCACC TGCGCCCGGG TCGCGGGCTG GAGCGCCCAC GTCATGGAGC AGAAGAAGCT GGGCCGTCTG GTGCGCCCGG CCGCCACCTA CGTCGGTCCC GGCCCGCGCA AGCCCGAGAC CGTTCCGGGC TGGAACGAGG TCGCCGACTG A
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Protein sequence | MAEFKPGLEG VVAFETEIAE PDKQGGSLRY RGVDIEDLIG HASYGHVWGL LVDGAFGPGL PPAEPFPVPV HTGDIRVDVQ SAVAMLAPYW GLGQLLDISD EQAREDLARV SVTALSYVAQ SARGVGRPAV PQKEIDKSDT IVERFMRRWR GEPDPRHVKA VDAYFISAAE HGMNASTFTA RVVASTGADV AACISSGIGA LSGPLHGGAP SRVLHMLEEV ERTGDAKTYV KGVLDRGERL MGFGHRVYRA EDPRARVLRR TAKELGSERY EVAEALEKAA LAELKERKPD RVLATNVEFW SAVVLDFAQV PADMFTSMFT CARVAGWSAH VMEQKKLGRL VRPAATYVGP GPRKPETVPG WNEVAD
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