Gene Snas_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1016 
Symbol 
ID8882201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1078111 
End bp1079211 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content71% 
IMG OID 
ProductCitrate (Si)-synthase 
Protein accessionYP_003509819 
Protein GI291298541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.525155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00235766 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGAAT TCAAGCCAGG TCTCGAAGGC GTAGTCGCCT TCGAGACGGA GATCGCCGAA 
CCCGACAAGC AGGGCGGCTC GCTGCGATAT CGCGGTGTCG ACATCGAGGA TCTCATCGGC
CACGCCTCCT ACGGCCACGT GTGGGGCCTT CTCGTGGACG GCGCCTTCGG GCCGGGCCTG
CCCCCGGCCG AGCCGTTCCC GGTTCCGGTG CACACCGGGG ACATCCGCGT CGACGTCCAG
TCGGCCGTGG CCATGCTGGC CCCCTACTGG GGCCTGGGCC AGCTGCTGGA CATCAGCGAC
GAGCAGGCCC GCGAGGACCT GGCGCGGGTA TCGGTGACCG CGCTGTCCTA TGTGGCGCAG
TCGGCGCGCG GGGTGGGTCG GCCCGCGGTG CCGCAGAAGG AGATCGACAA ATCCGACACC
ATCGTGGAAC GCTTCATGCG CCGCTGGCGC GGCGAGCCTG ACCCCCGGCA TGTCAAGGCC
GTCGACGCGT ACTTCATCTC CGCCGCCGAG CACGGCATGA ACGCCTCCAC CTTCACCGCC
CGCGTCGTCG CCTCCACCGG CGCCGACGTG GCCGCCTGCA TCTCCTCCGG CATCGGCGCC
CTGTCCGGCC CGCTGCACGG CGGCGCGCCC TCCCGGGTCC TGCACATGCT CGAGGAGGTC
GAGCGCACCG GCGACGCCAA GACCTACGTC AAGGGCGTGC TGGACCGCGG CGAGCGGCTG
ATGGGCTTCG GGCACCGGGT CTACCGGGCC GAGGATCCGC GGGCGCGGGT GCTGCGCCGC
ACCGCCAAGG AACTGGGTTC GGAGCGTTAC GAGGTCGCCG AGGCGCTGGA GAAGGCGGCG
CTGGCGGAAC TGAAGGAACG CAAGCCCGAC CGGGTGCTGG CCACCAATGT GGAGTTCTGG
TCCGCGGTGG TGCTGGACTT CGCGCAGGTG CCCGCCGACA TGTTCACGTC GATGTTCACC
TGCGCCCGGG TCGCGGGCTG GAGCGCCCAC GTCATGGAGC AGAAGAAGCT GGGCCGTCTG
GTGCGCCCGG CCGCCACCTA CGTCGGTCCC GGCCCGCGCA AGCCCGAGAC CGTTCCGGGC
TGGAACGAGG TCGCCGACTG A
 
Protein sequence
MAEFKPGLEG VVAFETEIAE PDKQGGSLRY RGVDIEDLIG HASYGHVWGL LVDGAFGPGL 
PPAEPFPVPV HTGDIRVDVQ SAVAMLAPYW GLGQLLDISD EQAREDLARV SVTALSYVAQ
SARGVGRPAV PQKEIDKSDT IVERFMRRWR GEPDPRHVKA VDAYFISAAE HGMNASTFTA
RVVASTGADV AACISSGIGA LSGPLHGGAP SRVLHMLEEV ERTGDAKTYV KGVLDRGERL
MGFGHRVYRA EDPRARVLRR TAKELGSERY EVAEALEKAA LAELKERKPD RVLATNVEFW
SAVVLDFAQV PADMFTSMFT CARVAGWSAH VMEQKKLGRL VRPAATYVGP GPRKPETVPG
WNEVAD