Gene Snas_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1001 
Symbol 
ID8882186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1061421 
End bp1062044 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509804 
Protein GI291298526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.642132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCATC CGCTGCTTTC GTATTTCCTC GACGCCGCCG ACGGCAAGTT TCCGGGCGCG 
GATGGGCGGT GTGTCGTGGT GCCCCCGCTG TCGGGTGGGT TGGAGTGTTC GGTGGCGTTC
ACCGGCTTCG CCGTGGTGGC GACGGCGTTG ACACCGGACG CGGTGGCGGA CCAAGGACCG
GACGGGTTCG GGGAGTCGAT GGCACCGGAT TTCCTGCGGT GGCTGGCGGG CCCCGACGGG
GAGATCGGGG TCTTGGACGC GACCTTGGTG GGGCGGGGAA ACCGTGCGGC ACCGGGGTTG
CCGGAGTTGG GGGACGTCGA TCATCCTCGG GTGCGGCACG CGCGCCAGTG GCGGAAAGAC
GTGCGGGTCT ACGGAGACGA GCGAGGGCTG GTGACGTTGG CCAGCGGGCT TGCGGGGCGC
CGCGAGTTGA GCATCGAGTT GGACGGCGGT TTCGGTACCG GGGTGGGACG GGGGTTGTTG
CGGGACGCGT TGGGCTTGGT ACCGGATGGG GAACCGGTGT TCGCGGCGGT TTCGCCGGGT
AACGCGCGGT CGTTGCGGGC GTTCTTGGCG GTGGGGTTCA CGCCGATCGG TTCCGAGGTG
CTCCTGCGGC CGGTGCGCGG CTGA
 
Protein sequence
MDHPLLSYFL DAADGKFPGA DGRCVVVPPL SGGLECSVAF TGFAVVATAL TPDAVADQGP 
DGFGESMAPD FLRWLAGPDG EIGVLDATLV GRGNRAAPGL PELGDVDHPR VRHARQWRKD
VRVYGDERGL VTLASGLAGR RELSIELDGG FGTGVGRGLL RDALGLVPDG EPVFAAVSPG
NARSLRAFLA VGFTPIGSEV LLRPVRG