Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0945 |
Symbol | |
ID | 8882129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 999236 |
End bp | 1000723 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | multi antimicrobial extrusion protein MatE |
Protein accession | YP_003509749 |
Protein GI | 291298471 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.903745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAGG TAGCCGAGGC GGCACCGCCT CGCCTCCGCC AACCATCCAC AGTGCTGCGC GCCACCGCCC GTGGCGGCCT GGTGAACCTG GCCGGGGCGG CGGTGGCGGG ACTGAGCGGA CTGGTCATCA CCTGGCTGGT GGCCGCCGGA CTCGGGCCGC GGGTCGCGGG GCAGTTCTTC ACCGCGACCA CGGCGTTCCT GCTGGCGCTG GCCATCGCCC GACTGGGAAC CCCGACCGGG CTGGTGTACT GGTTCGCCCG GCTGCGTCAG GAGGGGCGGC ACGGCGAACT GCGGTCGATG CTGACCGCCG CGCTGGTGCC GGTGTGCGCG CTGTCGCTGG TGTTCGCCGT GGCGGGCCTG GTGTTCGCCG AGTCCTTCGC CAGCGCCGGC ATCCTGCGGG TGCTGGCGGT GTTCCTTCCG GCGGCGGTGC TGATGGAGGC GCTGCTGGCG GCCAGTCGCG GCTTCGGCGG AATGCGGGAG TCCGTCCTCA TCGACAAGCT CGGCCGCTCG GGCACCCAGG TGGTGCTGCT GGCGGCGATC GTCCTCGGCT GGCAGACCGG GGTGTTCACG GTGACGGTGG CGTGGGCGTT GCCGTTCCTT CCGGCGGCGC TGCTGTCGGC GCACGTGGTG CGGTTGCGGT TGCGCCGCGA CCCGCCCGAC CCTGACAGTC CCTCGTGGAC TCAGCAGCTG CGTCCGTTCT GGACGTACAC GGCGCCCCGG GCGCTGGCGG GGGTCGCGCA GCTTGGCTTG CAGCGGCTGG ACATCCTGCT GGTGGCGACG CTGCTGGGCT TCGCGCAGGC GGCCGTCTAC ACGGTGGCCA CCCGCTTCGT CACCGTCGGG CAGCTCATCT CGGGCGCGAT CGGCACCGCG GTACAGCCTC GACTGGCCAC CAGCATGTCC GGCCGCGACT ACGCCACCGC CTCGACGCTG TACCGCACCA CGACCTCGTG GATCGTGCTG GCCTGCTGGC CGGTCTATCT GCTGGTGGCA CTCGCCGCGC CCTGGTACCT GCGGGTCTTC GGACCCGAGT ACGTCACCGG CGAGGCGATC GCGGTGGTGT GGGTACTGGC CGCCGGGATG CTGCTGGCCA CCGCGTGCGG CGTCGTCGAC AGTGTCCTGG TGATGGCCGG ACGCACCGGC TGGCAGCTGT ACAACGTGGC CGCCGCGTTC GCGGTCAACA TCGTCGTCGA CCTGCTGCTG ATCCCCCGGA TCGGGATCCT GGGGGCGGCG ATCGGCTGGA CGGCGGGCAT CGCGGTCAAC AACCTGATGC CGCTGCTGCA ACTGGCGCGG GTCTACCGGC TGCACCCGAT CGGCCGCGCG ACCCTCAAGG CGATGGCGCT GTCGGGACTG TGCTGTGGAC TCATCCCCGG CGTGGCCGCC CTGGCCGGGG AGGCCGCGTT GGCGGTCGCG ATCGGCGGCT GCGCGGTGAT CTACCCGCTG TCGGCGTGGC GTGCCCGCAA AACCCTGTTC ACCACGACGG ATACGTGA
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Protein sequence | MAQVAEAAPP RLRQPSTVLR ATARGGLVNL AGAAVAGLSG LVITWLVAAG LGPRVAGQFF TATTAFLLAL AIARLGTPTG LVYWFARLRQ EGRHGELRSM LTAALVPVCA LSLVFAVAGL VFAESFASAG ILRVLAVFLP AAVLMEALLA ASRGFGGMRE SVLIDKLGRS GTQVVLLAAI VLGWQTGVFT VTVAWALPFL PAALLSAHVV RLRLRRDPPD PDSPSWTQQL RPFWTYTAPR ALAGVAQLGL QRLDILLVAT LLGFAQAAVY TVATRFVTVG QLISGAIGTA VQPRLATSMS GRDYATASTL YRTTTSWIVL ACWPVYLLVA LAAPWYLRVF GPEYVTGEAI AVVWVLAAGM LLATACGVVD SVLVMAGRTG WQLYNVAAAF AVNIVVDLLL IPRIGILGAA IGWTAGIAVN NLMPLLQLAR VYRLHPIGRA TLKAMALSGL CCGLIPGVAA LAGEAALAVA IGGCAVIYPL SAWRARKTLF TTTDT
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