Gene Snas_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0945 
Symbol 
ID8882129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp999236 
End bp1000723 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content72% 
IMG OID 
Productmulti antimicrobial extrusion protein MatE 
Protein accessionYP_003509749 
Protein GI291298471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.903745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGG TAGCCGAGGC GGCACCGCCT CGCCTCCGCC AACCATCCAC AGTGCTGCGC 
GCCACCGCCC GTGGCGGCCT GGTGAACCTG GCCGGGGCGG CGGTGGCGGG ACTGAGCGGA
CTGGTCATCA CCTGGCTGGT GGCCGCCGGA CTCGGGCCGC GGGTCGCGGG GCAGTTCTTC
ACCGCGACCA CGGCGTTCCT GCTGGCGCTG GCCATCGCCC GACTGGGAAC CCCGACCGGG
CTGGTGTACT GGTTCGCCCG GCTGCGTCAG GAGGGGCGGC ACGGCGAACT GCGGTCGATG
CTGACCGCCG CGCTGGTGCC GGTGTGCGCG CTGTCGCTGG TGTTCGCCGT GGCGGGCCTG
GTGTTCGCCG AGTCCTTCGC CAGCGCCGGC ATCCTGCGGG TGCTGGCGGT GTTCCTTCCG
GCGGCGGTGC TGATGGAGGC GCTGCTGGCG GCCAGTCGCG GCTTCGGCGG AATGCGGGAG
TCCGTCCTCA TCGACAAGCT CGGCCGCTCG GGCACCCAGG TGGTGCTGCT GGCGGCGATC
GTCCTCGGCT GGCAGACCGG GGTGTTCACG GTGACGGTGG CGTGGGCGTT GCCGTTCCTT
CCGGCGGCGC TGCTGTCGGC GCACGTGGTG CGGTTGCGGT TGCGCCGCGA CCCGCCCGAC
CCTGACAGTC CCTCGTGGAC TCAGCAGCTG CGTCCGTTCT GGACGTACAC GGCGCCCCGG
GCGCTGGCGG GGGTCGCGCA GCTTGGCTTG CAGCGGCTGG ACATCCTGCT GGTGGCGACG
CTGCTGGGCT TCGCGCAGGC GGCCGTCTAC ACGGTGGCCA CCCGCTTCGT CACCGTCGGG
CAGCTCATCT CGGGCGCGAT CGGCACCGCG GTACAGCCTC GACTGGCCAC CAGCATGTCC
GGCCGCGACT ACGCCACCGC CTCGACGCTG TACCGCACCA CGACCTCGTG GATCGTGCTG
GCCTGCTGGC CGGTCTATCT GCTGGTGGCA CTCGCCGCGC CCTGGTACCT GCGGGTCTTC
GGACCCGAGT ACGTCACCGG CGAGGCGATC GCGGTGGTGT GGGTACTGGC CGCCGGGATG
CTGCTGGCCA CCGCGTGCGG CGTCGTCGAC AGTGTCCTGG TGATGGCCGG ACGCACCGGC
TGGCAGCTGT ACAACGTGGC CGCCGCGTTC GCGGTCAACA TCGTCGTCGA CCTGCTGCTG
ATCCCCCGGA TCGGGATCCT GGGGGCGGCG ATCGGCTGGA CGGCGGGCAT CGCGGTCAAC
AACCTGATGC CGCTGCTGCA ACTGGCGCGG GTCTACCGGC TGCACCCGAT CGGCCGCGCG
ACCCTCAAGG CGATGGCGCT GTCGGGACTG TGCTGTGGAC TCATCCCCGG CGTGGCCGCC
CTGGCCGGGG AGGCCGCGTT GGCGGTCGCG ATCGGCGGCT GCGCGGTGAT CTACCCGCTG
TCGGCGTGGC GTGCCCGCAA AACCCTGTTC ACCACGACGG ATACGTGA
 
Protein sequence
MAQVAEAAPP RLRQPSTVLR ATARGGLVNL AGAAVAGLSG LVITWLVAAG LGPRVAGQFF 
TATTAFLLAL AIARLGTPTG LVYWFARLRQ EGRHGELRSM LTAALVPVCA LSLVFAVAGL
VFAESFASAG ILRVLAVFLP AAVLMEALLA ASRGFGGMRE SVLIDKLGRS GTQVVLLAAI
VLGWQTGVFT VTVAWALPFL PAALLSAHVV RLRLRRDPPD PDSPSWTQQL RPFWTYTAPR
ALAGVAQLGL QRLDILLVAT LLGFAQAAVY TVATRFVTVG QLISGAIGTA VQPRLATSMS
GRDYATASTL YRTTTSWIVL ACWPVYLLVA LAAPWYLRVF GPEYVTGEAI AVVWVLAAGM
LLATACGVVD SVLVMAGRTG WQLYNVAAAF AVNIVVDLLL IPRIGILGAA IGWTAGIAVN
NLMPLLQLAR VYRLHPIGRA TLKAMALSGL CCGLIPGVAA LAGEAALAVA IGGCAVIYPL
SAWRARKTLF TTTDT