| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0931 |
|---|
| Symbol | |
|---|
| ID | 8882115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 984663 |
|---|
| End bp | 985310 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003509735 |
|---|
| Protein GI | 291298457 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.588864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGACA GCAGCAGCAA GCCCGTCGCC CGCCGGGTCA GGATGTCCTC AGCGCAACGC
CGAGAACAGC TGATCATGGT GGCGCGGCGG GCTTTCGCCG AACGCGGCTT CGACGGCACC
AGCGTCGAGG AGATCGCCGC GCGCGCCAAG GTTTCCAAAC CGGTGGTCTA CGAGCACTTC
GGCGGCAAGG AGGGCATGTA CGCCGTGGTC GTCGACCGCG AGGTGCGGGC CCTGCTCGAC
CGCATCACCA AGGCCCTGAC CGGCGGCCAC CCCCGCGAGC TCGTCGAGCA GGCCGCGCTG
GCGCTGCTGG ACTACATCGA GGGTGACACC GACGGGTTCC GGGTGCTGGT GCGGGACTCG
CCGGTCATGT CGGGTTCGGG GAACTTCTCC AGCGTTTTCA ACGATGTAGC CCACCAGGTC
GAGGGCATCC TCGGCAAGCA GTTCAAGGAA CGCGGTTTCG ACCCCAAGCT CGCCGAGCTG
TACGCCCAGG CTCTGGTCGG GATGGTGGGG CTGGTGGGCC GGTGGTGGTT GGAGGTCCGC
AAGCCGAAGA AGGAGGCGGT GGCCGCGCAC CTGGTCAACC TCGCCTGGAA CGGCCTGCAC
AACCTGGAGA CCAAACCGAA ACTGGGGCAG CGCCCGAAGC AGGACTAG
|
|---|
| Protein sequence | MNDSSSKPVA RRVRMSSAQR REQLIMVARR AFAERGFDGT SVEEIAARAK VSKPVVYEHF
GGKEGMYAVV VDREVRALLD RITKALTGGH PRELVEQAAL ALLDYIEGDT DGFRVLVRDS
PVMSGSGNFS SVFNDVAHQV EGILGKQFKE RGFDPKLAEL YAQALVGMVG LVGRWWLEVR
KPKKEAVAAH LVNLAWNGLH NLETKPKLGQ RPKQD
|
|---|
| |