Gene Snas_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0920 
Symbol 
ID8882104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp974216 
End bp975823 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content70% 
IMG OID 
ProductMethyltransferase type 12 
Protein accessionYP_003509724 
Protein GI291298446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTCTGA CGATCTCGAC CACCCACGAA CCGGCCACCG ACCTCGGTTA CCTGCTGTAC 
AAGCATCCCG ACCGGGTGCG ACCGTTCAGC CAGTCCTTCG GCACCGCGAC GGTGTTCTAC
CCGGAGGCCA CCGAGAAACG CTGCACGGCC GCGCTGCTGC TGGAGGTCGA TCCCGTCAAA
CTGACCCGCT CACGCGGCAA GAACGCGCCC GACTTCTCGC TGGGCCAGTA CGTCAACGAC
CGGCCCTACG CGGCCTCCTC GCTGTTGGCG GTGGCGCTGG GCGACGTCTA CTCGACCGCC
CGCAATGGAC GCTGCGACTC CCGGCCGGAA CTGGCCGCGT CGGCGATCCC GCTGGAGATC
TTCGCCGCCG CCGTCCCGTG CCGGGGCGGC CCACAGCTGG CCGCCGAACT GTTCGAACCG
TTGGGGTGGA CGGTGTCGGC GGAACCAGTG CCGTTGGACG CGTCGTTCCC GGACTGGGGC
GACTCGCGGT ACGTCCAGTT GCGACTGACG GGCACGATGC GGTTGGCCGA CGCGCTCAAC
CACCTGTACG TGCTGCTGCC GGTTCTCGAT GACGCCAAGC ACTACTGGGT CGACATCGCC
GAAGTGGACA AGCTGGTGCG CGGTGGTGGC GACTGGCTCG CCGACCACCC CCGCCGGAGC
CTGATCGCCC GCCGCTACCT GGCCCGCAAG CGGGGCCTGG AGCGGGTGGC GTTCGCGCGG
CTGGCCGAAG TGGACGAAAC CGGCGACGAG CTCGAACCCC CCGTCGACGA AGAACCCGCG
ACCGACGACG GTGACGTGGC AACGGTTGAC GCCGAGCGGC CCGCGAGCGC AGCCGACAGC
GGCGTAGCCG TGACCGACAC GGCGCGGTCG GCAGCCGATG GCGACCGGCC CACCGACGCC
GCCGAGCGGC CGCAGGCCGA AGGCCAGGCC GCCGCGGACG GCGCGGCGGA CCAGCCGCAG
GCCACCGCAG ACGGCGAATC CCCAGCTGCC GAAGCCGAAC CCGCCTCGCC CCCGCTCAAC
AAGCAGCGGC ACGCCGCCGT CCTCGCGGCC GTCGCCGAGT GCGGCGCGTC CAGCGTCATC
GATCTGGGCT GCGGCTCCGG CAAGCTGCTG AGCGAGCTGG TCAAGAACCG CAACCTGACC
CGCATCGCGG GCGTTGACGC GTCCACACTG GCCCTGAAGC TGGCCGCCCG CCACCTCAAG
CTCGACCGGC TCAGCGATCG GCAGGCCGAG CGGCTGTCGC TGTTCCAGGC CGCGCTGACC
TACACCGATG ACCGGCTCGC CGGTTACGAC GCGGCGGTGC TCATGGAGGT CATCGAGCAC
GTCGACCCGC CCCGGCTGGC GGCGCTGGCG AAGGTCGTGT TCGGCTCGGC GCGTCCGGCG
ACGGTCATCG TGACGACGCC CAACGTCGAA TACAACGTCC ACTATGAACT CGAACCGGGC
CGGATGCGGC ACAGCGACCA CCGCTTCGAA TGGAACCGGG ACGAGTTCCG CGACTGGGCC
ACCGACGTGG CCACGTCCTA CGGATACACC GTCGCCATCA GCGGCGTCGG CGACGAGAAG
CCCGAAACCG GCTGCCCCAC CCAGATGGGA GTGTTCACCC GTGGTTGA
 
Protein sequence
MLLTISTTHE PATDLGYLLY KHPDRVRPFS QSFGTATVFY PEATEKRCTA ALLLEVDPVK 
LTRSRGKNAP DFSLGQYVND RPYAASSLLA VALGDVYSTA RNGRCDSRPE LAASAIPLEI
FAAAVPCRGG PQLAAELFEP LGWTVSAEPV PLDASFPDWG DSRYVQLRLT GTMRLADALN
HLYVLLPVLD DAKHYWVDIA EVDKLVRGGG DWLADHPRRS LIARRYLARK RGLERVAFAR
LAEVDETGDE LEPPVDEEPA TDDGDVATVD AERPASAADS GVAVTDTARS AADGDRPTDA
AERPQAEGQA AADGAADQPQ ATADGESPAA EAEPASPPLN KQRHAAVLAA VAECGASSVI
DLGCGSGKLL SELVKNRNLT RIAGVDASTL ALKLAARHLK LDRLSDRQAE RLSLFQAALT
YTDDRLAGYD AAVLMEVIEH VDPPRLAALA KVVFGSARPA TVIVTTPNVE YNVHYELEPG
RMRHSDHRFE WNRDEFRDWA TDVATSYGYT VAISGVGDEK PETGCPTQMG VFTRG