Gene Snas_0911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0911 
Symbol 
ID8882095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp966770 
End bp967426 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content75% 
IMG OID 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_003509715 
Protein GI291298437 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.302839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATTCAT CGCTCCCCTT GGGACGATTG CACGTCATCA CCGACACCCG GCCCGGAGCC 
GATCCGGTGC GCGTCGCGCG CGCCGCGCTG GCCGCGGGCG CGCCGGTGCT CCAGGTCCGG
GTAGCCGATC ACCACACCGA TCGGGAAGCC TTCGACCTGA CGTTGACGCT CGTCGAACTG
TGCCGCGAGT ACGGCGCCAC CTGCCTGGTC AACGACCGGC TGCACGTGGC CCTGGCGGTC
GGGGCCGACG GCGGACACGT CGGCGCCCAC GACCTGCCGG TGCACGCCGC GCGGGTGGTG
CTGGGTGGGA CGGCGGTCAT CGGCGGCACC TGCCGGAACC CGGAGGCGGC CCGGGCGCTG
CGGCGCGCGG GCGCCAGCTA CCTGGGGGCG GGGCCCGCGT TCGCCACCAC GACCAAGGAC
GGCCTGCCGG AACCGATCGG GCCCGGCGCC ATCGGGCGGA TCGCCGCGGC CGTCGACATC
CCGGTCATCG GGATCGGTGG CGTCACCGCC GCGACCGCCG GTGAGCTGAT CGAGGCGGGC
GCCCACGGCG TGGCCGTCGT CGGCGCGATC TCGCTGGCAC CCGACCCCTA CGCCGCGACG
CGGGAACTGC TGGACGTCGT GGAGCGAGCA GCCCGCCAAC GAGGAAGGAG CCGGTGA
 
Protein sequence
MDSSLPLGRL HVITDTRPGA DPVRVARAAL AAGAPVLQVR VADHHTDREA FDLTLTLVEL 
CREYGATCLV NDRLHVALAV GADGGHVGAH DLPVHAARVV LGGTAVIGGT CRNPEAARAL
RRAGASYLGA GPAFATTTKD GLPEPIGPGA IGRIAAAVDI PVIGIGGVTA ATAGELIEAG
AHGVAVVGAI SLAPDPYAAT RELLDVVERA ARQRGRSR