| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0906 |
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| Symbol | |
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| ID | 8882090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 959803 |
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| End bp | 961284 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | Integrin alpha beta-propellor repeat protein |
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| Protein accession | YP_003509710 |
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| Protein GI | 291298432 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.40669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAGA AAGTCGCGCG GCGCGTTGCT GCGTCCATTA TGATCGCCGC TTTGCCGGTG
GCATTGGTTC AGGCGGCCGG TCCCGCCAGC GCGGGCGAGT TCGTCGCCGA CCCGATCAAC
GACTTCGACT GCGACGGCCA ACGGGACGCG CTGGACGCCG ACAGTGCCGC GAGCGTGGGC
GGGCACGACG CGGCCGGGGC CGTGCGGGTG CAGTACAGCG GCACCGCCGC CGCCATCACC
ATTGACCAGT CCACCCCGGG CATCGCGGGA AGCCCGGAGA CCGAGGACCA GTTCGGCACC
GAGGTCACCG CCTACGACGA GAACGGCGAC GGTTGCGACG ACCTGGTCAT CGGTGCGTCC
TATGAGGACC TTGTCGACGA GGGCGGCGAG GAGCAGGCCG ACGCCGGGAT GATCTGGATG
ATCCCGGGTT CGGCTGCGGG CCTTGACACC CAGGCGTCCA CGAGCCTCAA CCTCAACAGC
CCGGGCGTCC CCGGCTCGAT CGCCGAGTAC CAGTGGTTCG GCCGCACCCT GTCGTCCGGC
GAGACCCAAG GCGGCGAACC GTACCTGGTG GCCGCCAGCC CCGGCTACCG CACCGGCTCG
ACCCAGTGGG CCGCCGGAGC CGTCTACTAC CTGCGCGGCG ACGAGACCTA CCGGATCACA
CAGGACAGTC CCGGGGTGCC GGGCACCGCC GAGTCCTACG ACTACTTCGG TGAGCGTATC
GCCGTGACCG ACCGCTACGT CGCGATCAGC GCTCCCGGCG AATCCATTGG CAGCAAGTCG
AACGCGGGCA TGGTCCACGT CTTCGACCAC AACCTGCAAG GCGGCGTCCT GACCACCGTC
GGCGCCTTCC ACCAGGACAG CCCGGGGATC TCCGGCACCA CCGAGACCGG CGACCTGTTC
GGCGACGGCC TGGCCGTCAT CGGATACCGC GCCAGCGCGA GTGCTCCGGT CAGCGCTCTG
GTCTCGGCCG GTTCGCCCGG CGAGGCGATC GGTTCCAGCG GCGGCTACAC CGGCATGGCG
CACCTGATCC GGGTGTCGTC GGTCAACGAT CTCGCCCAGG TGTCCTCGGT GCACCAGGAC
TCGCCCGGCG TGCTGGACGT CGCCGAGTTC AACGACGGCT TCGGCGCCGA CACCGCGCTG
GCCACCTCCA AGGACGACGG CATCGGCAGC CCCGCCACGA CCCACTGGGC GGTCGAGGCC
TGGGAGTTCG AGGACGACGG GCAGGGCGGC GAGAACGACA ACCCGCAGGT CCACGTCTTC
GCCAACCTGA CCGATCCCGG GGACGGTGAC CGGCTCATCG CCGGGAACGA CTACGGGCTG
CCGCTGGCGA GCACCCCGGT GATCCGGTCC CTGGACGCCA GCGACACCTA CCTGTACCTG
ACGATCCCGA CGGATCCCAC CGCCGTGTAC GGCGTGCCGT GGCAGAACAT CCTCGGCGGC
GGCAGCGAGG AGACCGTGAT CCACCGGGTC GATCCCTGGT AG
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| Protein sequence | MSKKVARRVA ASIMIAALPV ALVQAAGPAS AGEFVADPIN DFDCDGQRDA LDADSAASVG
GHDAAGAVRV QYSGTAAAIT IDQSTPGIAG SPETEDQFGT EVTAYDENGD GCDDLVIGAS
YEDLVDEGGE EQADAGMIWM IPGSAAGLDT QASTSLNLNS PGVPGSIAEY QWFGRTLSSG
ETQGGEPYLV AASPGYRTGS TQWAAGAVYY LRGDETYRIT QDSPGVPGTA ESYDYFGERI
AVTDRYVAIS APGESIGSKS NAGMVHVFDH NLQGGVLTTV GAFHQDSPGI SGTTETGDLF
GDGLAVIGYR ASASAPVSAL VSAGSPGEAI GSSGGYTGMA HLIRVSSVND LAQVSSVHQD
SPGVLDVAEF NDGFGADTAL ATSKDDGIGS PATTHWAVEA WEFEDDGQGG ENDNPQVHVF
ANLTDPGDGD RLIAGNDYGL PLASTPVIRS LDASDTYLYL TIPTDPTAVY GVPWQNILGG
GSEETVIHRV DPW
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