| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0900 |
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| Symbol | |
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| ID | 8882084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 952397 |
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| End bp | 955123 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003509704 |
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| Protein GI | 291298426 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.836617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.151973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTGCG ACATCCGGGT GCTGGGCCCG GTGACCGTCG TGAACGCTGG TGAACCCCTC
GACCTGGGAC ATCGTCGGCA ACGGACGGTG TTCGCCCTCC TCGCCGCCCA GGTGGGAACC
GAGGTCTCGA TGTCGTGGCT GGCCGAACAG GTGTGGGAAT CACGTCCGCC GCTGCGCGCC
CGCGACACCT TGTACACCTA TCTGTCCCGG CTGCGCAAGC TCTTGTCCGC TGTGGACGAG
GTGGAACTGC GGCGGCGCCG CAACGGTTAC CTGCTCGCCG CCGACGCCAC CACCGTCGAC
CTGTGCCGGT TTCGCGACCT GTCCGCGCGG GCGGCGCGCG TCGACGGGCC CGAGGCGCTC
GCGTTGCGGC GACAGGCGCT GGGATTGTGG CGGGGCGACG CGTTCGCCGA CGTCGCGGCA
CCGCTGCTCG ACACGCTGGG CGCCACATTG GAGTATGAGC GTTTCGGTGT GGAGCTGGAG
TTCCATGACG CGCTGTTGCG GGAGGGGCGG GGCACCGAAG CGCTGCCGAG GCTGCGCGAC
CTCGTCGATG GGAACCCACT GGACGAGCGC CTGGCCGGAC AGTACCTGCT CGCCCTGCAC
GCGAGTGGCG CGACCGACGA TGCCCTCGCG TACTTCGAGA CCCTGCGGAA CCGGCTGCTG
GCCGACCGGG GTACCGAACC CGGCGACCGG ATCCGGCGCC TGCGTGACGG ACTCCGGAAC
GCCGAGGGCG CCGCCGCGAT GCCATCCGCG ATGGTGCCCC GGCAGCTACC CGGCGACACC
GCGGTCTTCG CCGGTCGTGA AACGGAGCTG GCCCGGCTCG ACGCGTTGGC GCTCCACCCC
GGCGGCGAGT CCATCGTGGC GATCAGTGGG ACCGCCGGGG TCGGCAAGAC GACCCTGGCC
GTGCGCTGGG CACATCGAGC GGCGAAGCAC TTCCCCGATG GACAGTTGTA TGTGGACATG
CGTGGCTTCG GTCCCTCCGA ACGCGTGGTC ACCCCGTCCG AGGCGATTCG CGGACTCCTG
GCGGGACTCG GTGTTCCCGC CGACCGGATA CCGTCCGATT TCGACGCCCA GACGGCGCTG
TACCGCGGCC ACCTCGCCGG TCGCCGCGTC CTCGTCGTCT TCGACAACGC CCGCGATGCC
GCCCAGGTGC GACCGCTGCT GCCCGGCGGG GCGGGTTGCG TGGCGGTGGT GACCAGCCGC
AACGCCCTCA CCGGGCTGCT GGCCCCCGAC GCGGCGGCCT CGCTGACCGT CGACACGATG
CCGCTGCCCG ACTGCCGGGC CCTGCTGGCC AACCGGATCG GCGCCACCCG GGGCAGTGAC
CCGGCCGCGA CCGACGAGCT CATTGAGGCG TGCGCGCGGC TGCCGCTGGC GCTGAGCATC
GTGGCCGCGC GGGCCGTCAC CGACGTGAGT CTCACCCCGG CGCGGCTGTC CGCCCAGTTG
CGCGACGAGC GAACCAGGCT GGACCACCTC GACGCCGGGG ACAACGTGGC CAACGTCAGG
GCGGTGTTCT CGTGGTCCTA TCGGGCGTTG AGTCCCGAGG CGGCCCGGCT GTTCCGGCTG
CTGAGCCTGC ACCCGCGCGG CGAGATCTCG GCCGCGGCGG CGGCCAGTCT GGCGGGAACC
GATCTCGCCC CTGCCCGCGG CGCACTGTCC GAACTGGTCG ACGCCGGGCT GCTGAGCCGC
CACGGCGGCG ACTTCGGCTT CCACGACCTG CTGTTCGAGT ACTCCCGCGG ACAGTGCCGC
TCCCACGAGA CCGCCTCCGC GACCCGGGCG GCGATCACCC GGGTGCTGAA CCACTTCGTA
CGCACCGCGT ACGCGGCATC CCGGCTGGCC GGACCATACC GCCGGGCCGT CCCGATCGAC
GTCTCCTGGG CGGAGTCCGT GACCAGCGAG CTCGGCACCG CCGACGAGGC CCTGGACTGG
TTGCGGTCCC GCAAGTCGGT GCTGCTGGCA GGGGTACGGC TGGCCGCCGA ACACGGTGTG
GACCGCTGCG TCACCGACCT GGCCTGGTCG CTGTCGGACT TCCTCAACCG CAACCGGCAC
TGCGAGGACG CGGTCGCGGC GCAACGGCTT GCCGTGGCCG CGGCCCACCG GCTCGGCGAC
CGGGCAGCAC TGGCCCGCGC CCACCGCGGC GCGGCCCGCG GGCTCACCGT CCTGGGACAC
TTCGATGAAG CCGAGCGGGA CCTGCGAACC GCCCTCGAAC TCTTCGAGGC ACTCGACGAC
GACGGCGGCC GGGCCGATGT CCTGTCGGGC TTCGGTTTCC TGTGCAACCA GCGCGGGGAC
CACGCCAAGG GTCTAGAGGT CACGATGCGA GCGGTGGAAC TGCTCCGCGC GGGCGGACAC
ATCCCCGAGC TGATCCGCGA ACTCGGCAAC GCCGGTTGGT TCCACGCGCA ACTGGGCGAC
CACGAGGCCG CCATGGCCTA CTGCGTCGAG TCGCTGGAAC TGGCCGAGCG GGCCGGCGAA
CTGTCACTGC GCAACGCGCA GTGGAGCAGC CTCGGCTACG TCGCCTTCCG GCAGGGCGAC
CACCGACAGG CCATCGAGTA CTACGAACAC GCGCTGGCCC TGGATCGCGG CAGTCAGCAG
GACCGGCCCC ACGAGGCCGC GACCCTCGCG TACCTGGCAC AGGTGCACGA GGCGATCGGC
GACCACGATC GGGCCCGGTC CTACCGACGC GAGTCGAGGG CCATCCTGGA CGAACTGGGA
CTGCCGGTCC CGCCCGATCA GCCCTGA
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| Protein sequence | MTCDIRVLGP VTVVNAGEPL DLGHRRQRTV FALLAAQVGT EVSMSWLAEQ VWESRPPLRA
RDTLYTYLSR LRKLLSAVDE VELRRRRNGY LLAADATTVD LCRFRDLSAR AARVDGPEAL
ALRRQALGLW RGDAFADVAA PLLDTLGATL EYERFGVELE FHDALLREGR GTEALPRLRD
LVDGNPLDER LAGQYLLALH ASGATDDALA YFETLRNRLL ADRGTEPGDR IRRLRDGLRN
AEGAAAMPSA MVPRQLPGDT AVFAGRETEL ARLDALALHP GGESIVAISG TAGVGKTTLA
VRWAHRAAKH FPDGQLYVDM RGFGPSERVV TPSEAIRGLL AGLGVPADRI PSDFDAQTAL
YRGHLAGRRV LVVFDNARDA AQVRPLLPGG AGCVAVVTSR NALTGLLAPD AAASLTVDTM
PLPDCRALLA NRIGATRGSD PAATDELIEA CARLPLALSI VAARAVTDVS LTPARLSAQL
RDERTRLDHL DAGDNVANVR AVFSWSYRAL SPEAARLFRL LSLHPRGEIS AAAAASLAGT
DLAPARGALS ELVDAGLLSR HGGDFGFHDL LFEYSRGQCR SHETASATRA AITRVLNHFV
RTAYAASRLA GPYRRAVPID VSWAESVTSE LGTADEALDW LRSRKSVLLA GVRLAAEHGV
DRCVTDLAWS LSDFLNRNRH CEDAVAAQRL AVAAAHRLGD RAALARAHRG AARGLTVLGH
FDEAERDLRT ALELFEALDD DGGRADVLSG FGFLCNQRGD HAKGLEVTMR AVELLRAGGH
IPELIRELGN AGWFHAQLGD HEAAMAYCVE SLELAERAGE LSLRNAQWSS LGYVAFRQGD
HRQAIEYYEH ALALDRGSQQ DRPHEAATLA YLAQVHEAIG DHDRARSYRR ESRAILDELG
LPVPPDQP
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