| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0896 |
|---|
| Symbol | |
|---|
| ID | 8882080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 946908 |
|---|
| End bp | 947942 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_003509700 |
|---|
| Protein GI | 291298422 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0594951 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCA CCGAGCCCGC GACCGAGGCC GTCCGGCGCC CCCGGGTGCT GTCCGGAATC
CAGCCGACGG CCGACTCATT CCACCTCGGG AACTACCTGG GGGCGTTGCG GAACTGGGTC
GCCATGCAGG ACACACACGA TGCCTTCTAC TGTGTCGTCG ACCTGCACGC GATCACCGTC
GACCACGACC CGAAACTGTT GCGCAAGCGC AGCCGGATCG CCGCGGCGCA GCTGTTGGCC
GTCGGGATCG ACCCGGCCCG CTCCACCCTG TTCGTCCAGT CGCAGGTGCC CGAGCACCCG
ATGCTGTCGT GGATCCTGGA GTGCCACACC GGTTTCGGTG AGGCCGGGCG GATGACCCAG
TTCAAGGACA AATCCGCCAA GAACGAACGC GTCTCGGTGG GACTGTTCAC CTACCCGATC
CTGCAGGCCG CCGACATCCT GCTGTACCGC GCCGACGCCG TCCCGGTCGG CGAGGACCAG
CGGCAGCACC TGGAGTTGTC GCGCGACCTG GCACAGCGCT TCAACACCAA GTACGGCAAC
GTCTTCACCG TCCCCGAGGC CCACATCATC AAGGCCACCG GGACGATCCA GGACCTCACC
GAACCGGCCC GCAAGATGTC GAAGTCGAAC TCGCAGCCCG CGGGCATCAT CGACCTGCTG
GACGACCCGA ACCGGATCCG CAAGAAGATC AAGTCCGCCG TCACCGACAC CGGCCGCGAG
ATCGTCTTCG ACCCGGAGAA CAAGCCCGGC GTCTCCAACC TGCTGACGAT CTACTCGTCG
CTCACCGAGA CCTCGATCGA GGAACTGCAG AACCGCTACG CCGACTCCGG CTACGGCGAC
TTCAAGAAGG ACCTCGCCGA GATCGTCGCC GACTTCTGCG CCCCGATCGC GCAGCGCACC
AAGTCGTACC TCGACGACAC CGCCGAGCTG GACAAGATCC TGCTGGCCGG TGCCGAGAAG
GCGCACTCCG TCGCCGCCCA CACCCTCGCG CGGGTCTACC GCAAGATGGG CTTCCGAGAA
CCGGTAAGGG ACTAG
|
|---|
| Protein sequence | MTSTEPATEA VRRPRVLSGI QPTADSFHLG NYLGALRNWV AMQDTHDAFY CVVDLHAITV
DHDPKLLRKR SRIAAAQLLA VGIDPARSTL FVQSQVPEHP MLSWILECHT GFGEAGRMTQ
FKDKSAKNER VSVGLFTYPI LQAADILLYR ADAVPVGEDQ RQHLELSRDL AQRFNTKYGN
VFTVPEAHII KATGTIQDLT EPARKMSKSN SQPAGIIDLL DDPNRIRKKI KSAVTDTGRE
IVFDPENKPG VSNLLTIYSS LTETSIEELQ NRYADSGYGD FKKDLAEIVA DFCAPIAQRT
KSYLDDTAEL DKILLAGAEK AHSVAAHTLA RVYRKMGFRE PVRD
|
|---|
| |