Gene Snas_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0895 
Symbol 
ID8882079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp945844 
End bp946626 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_003509699 
Protein GI291298421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0542275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCCC AGCAGCGCCA GGCTGTGATC GCCGAACGCG TCCGAAGCCA TGGCGCCGTC 
CGGGTCGCCG AACTCGTCGA GGAGTTCGGT GTCTCGGACA TGACGATCCG CCGGGATCTG
GAGACCCTCG CCGATCGCGG CCTCGTATCA AAAGTCCACG GTGGAGCAAC GGCGGTCGAC
ATCGGGTCGA CCGACGAACC GGGCTTCGCC GCCAAGTCGG TGCGGCAGAA AGAGGCCAAG
GAGGCCATCG CCGCCGCCGC GGCCAAACTC GTGACCCCGG GCCAGGCCAT CGCGCTGTCC
GGCGGCACCA CGACCTGGAC GCTGGCCCAC CACCTCGTGG GCGTCGCCGG GCTGACCGTC
GTCACCAACT CGGTGCCGGT CGCCGACGTC TTCTACCGTT CCGGACGCGG CGACCAGACG
GTGATCCTCA CCGGCGGCAT CCGCACCCCC TCCGACGCGC TGGTCGGGCC GTTCGCGGTC
GCGTCCCTCA AGTCCATCAA TGTGGACACG CTGTTCCTCG GCGTCCACGG TGTCAACGCC
ACCGCCGGTT TCACCACCCC GAACCTGATG GAGTCCGAGA CCGACAAGGC GCTGATCGCC
GCCGCCCGCA AGCTGGTCGT GGTCGCCGAC TCCACCAAGT GGGAGATCGT CGGCATCCGC
ACCATCGCCT GCCCCGACGA CGCCGACGTG CTGGTGACCG ACGCCGGTCT GCCGGAGGAG
GCGCGGGCCG CGCTTCGCGA AGCGGTCGGG CAGCTGATCA TCGCCGGAGA GGACAACCGG
TGA
 
Protein sequence
MLAQQRQAVI AERVRSHGAV RVAELVEEFG VSDMTIRRDL ETLADRGLVS KVHGGATAVD 
IGSTDEPGFA AKSVRQKEAK EAIAAAAAKL VTPGQAIALS GGTTTWTLAH HLVGVAGLTV
VTNSVPVADV FYRSGRGDQT VILTGGIRTP SDALVGPFAV ASLKSINVDT LFLGVHGVNA
TAGFTTPNLM ESETDKALIA AARKLVVVAD STKWEIVGIR TIACPDDADV LVTDAGLPEE
ARAALREAVG QLIIAGEDNR