| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0890 |
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| Symbol | |
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| ID | 8882074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 940348 |
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| End bp | 941712 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | LicD family protein |
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| Protein accession | YP_003509694 |
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| Protein GI | 291298416 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.147531 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTCT CCACCAAGCA GACCGTCGTT CGGGTTCTCA GCCGCGCCCC CGTTTACCGG
GCCATGCCCT CGGGCGCGGC CCGCACCTAC GCGGCGCTGA AGTATCTGGG TCAGAACTCC
AACCAGGAGG AGATCACCAG GTTCATCCGC GCCTCGGGCG GGATCCCCAC CCGATATCTG
TCGGTGGCGC TGGTCGCGGC CCGCGCGGTG TTTCGGGCCG GAGCCGACGA ACTGCTGACG
GACACGCTGG CCGCCCTCGA CGGTCGTTTC CCGGAATCGC CTGGGCTGCA AGCCTTGCAC
GCCGACTTCC ACGCCTACTA CGGCCGCTAC GAGGAGGCGC TCGAGTGCGC CCGCAACGGC
CGGATGCTGC AACCCTCGCA CGCGGGCTGC GTCGCCCGGA TGATCACCTA CGGCTACCGG
GTGCTGCCGC GCGACGAGGC CGACGCCGCC GCGGTGGTGG CGCTGAAGCG GTTCCCGCGC
ACCGGCGAGG TGCTGTGGGC CGTGGCGAAG ATGTGCGACT CGGCCGCCCA GTACGGACGG
CTCCAGGAGG CCTGGGACTC GCTGCCGCAC GAGGACCCCA CCGACCTGCA CAAGGCGCTG
CGCCAGCTGG CCACCGCCGC CGCCCGCGCG GGCGAGGTCG AGCGGGCGTG TGAGCTGTAC
AGCCGTGGCA TCCAGCTGAT CGTCGACGGC ATCGCTGTCG ACAACCCGAT CGTCGACTCC
AGCCTGGAGG GCAAGAGCCC CTGGGCCGCG TTCGAGGACC TGCACCGGGC GCTGGACGGG
GCCGGGGTGC CGTACTTCAT CGCCGCCGGT ACCGCGCTGG GCCTGGAGCG GCAGGGCCGT
CCGCTGTCGG CCGACAACGA CATCGACGTC GGGGTCTTCG AGGAGGACTT CGACCAGGAC
GCCCTGATCA AGCTGTTCGC GAAGAACCCG CGCTTCGACT TCGACGTGGT GCACCCGCAC
ACCAAGAAGG TCGGGCTCAA GCACCGGGGC GGCTCACCGA TCGACATCTT CCGGTTCTAC
CGCGACGGCG ACAAGATGTG GCACGACGCG GTGTTCGTCC GCTGGGGCAA CTCGCCCTTC
GAGATCAAGC GGCGCGAGTT CGAGGGCCTG AACCTGCCGC TGCCCGCGAC CATCGACAAC
TACCTCACCG AGAACTACGG CGACTGGCGC ACGCCCTACC CGGGCTTCGA CGCCTTCGAC
AGCAAGGACG CTCCCAACGT GGAGACGACC TGGCCGGAGT ATCTGAAACT GCACTACATT
CGGCGAGGGT ATAAGAAACT CACCAATGGC GACCGGACCG GAGCCGCCGC CGACCTGCGC
AGCGCTGGTG AGGAAGCGCT GGCCAGGACG GTGACCGCAT CATGA
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| Protein sequence | MAFSTKQTVV RVLSRAPVYR AMPSGAARTY AALKYLGQNS NQEEITRFIR ASGGIPTRYL
SVALVAARAV FRAGADELLT DTLAALDGRF PESPGLQALH ADFHAYYGRY EEALECARNG
RMLQPSHAGC VARMITYGYR VLPRDEADAA AVVALKRFPR TGEVLWAVAK MCDSAAQYGR
LQEAWDSLPH EDPTDLHKAL RQLATAAARA GEVERACELY SRGIQLIVDG IAVDNPIVDS
SLEGKSPWAA FEDLHRALDG AGVPYFIAAG TALGLERQGR PLSADNDIDV GVFEEDFDQD
ALIKLFAKNP RFDFDVVHPH TKKVGLKHRG GSPIDIFRFY RDGDKMWHDA VFVRWGNSPF
EIKRREFEGL NLPLPATIDN YLTENYGDWR TPYPGFDAFD SKDAPNVETT WPEYLKLHYI
RRGYKKLTNG DRTGAAADLR SAGEEALART VTAS
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