Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0888 |
Symbol | |
ID | 8882072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 937015 |
End bp | 938988 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | ferredoxin |
Protein accession | YP_003509692 |
Protein GI | 291298414 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.986677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.535707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACGC CGTCCGGCGG CCACAGTCGC GCCGCCCGCG TCATCCAATT CGTCTACACC GGACTGGCAC TGCTGCTTTC GCAACTGCCG CCACTGTTCC CGCCGACGTT CCCCGACGCC CGGGTACCCG CCTGGTACGC GACCGCCGCC CTCACCGCCG TGGTCGCGGT CCTGGCCACC TGGCGCCCGC GCACCCCCCG CGCCGTCATC CTGACCCTCG CGTGGGGCCA GGCGCTGGTG ACGATGGTCA ACGCCTTCGT CATCGGCGAC ATCCTCGCGA TGTTCAGCAC CTGGGTGTCG ATACCGGCCC TGGCCCTGCT CGCGGGCCAG ATCGGGCCAC GAGCCCGCAA AGCCTTGCTG GCGACGCATG TGATCACCTC GGCGATCTGG CTGGGCGTCG GTGTCACGTT CGTGCTCGTG TCGGTCATCG CGATGACCAC AACGGGCATC GAGGCGGCGA GGGTGTCCTA CGAACTCCTG GTCGTGTTCG ACATGACGCT GCTCCCCAAC GCGAACTTCG CGGCCTCGCT GGCGGGCATC GCGCTCGGCC TGACCACGGC CTGGGGGCTG ATGCGCTACT GGTGGGTGGC GATCAAGTTC TTCATTCCGC TGGTGATCCT GTTCGGCGCC TTCGGTTACA TGCACCCGAT GCTGGAAAGC GCCGCCGCCC AGGCGACCCG GCTCGCCGAG ACCGGCGGCA CGGTCTCCCA GATCGACGGC GCCGCCGAAG CGGTGTTCTG GAGCTTCGGG GTCTCGACGC TGAGCCTGGC GGCCGCGATG CTGCTGTCGC TGTACAAACC CGGCGGCCGC ACCCGTCGGG GCCGCCGCCA ACTGGAGCAG GCCCGCCAGC GCCGCGCGGC GGCCCGAACC GTCCCCGTCG CGGCGACGGC ACCAGCCGCG ACAACGGCGG CGGCTTCCGC GGCGAGCGCC TCACCAACGG CCACAAGCGT TCCCACGACG CCGAACGCCT CACCTACGGC CGCGAGCGTT CCCGCGACGG CGAGTGACTT GCCCACGGCC GCAAGCGTTC CCGCGACCGA GCTCGCCGCC GTCGTGGCCG ACACCCGTCT CATCGCCGAC GACACCGCCG CCGTGACCCT GCGCGCCGCC GACGGCTCAC CACTGCCGCA CTGGGCCCCC GGCGCCCACA TCGACCTCGT GCTCCCGTCC GGCAAGGTCC GCCAGTACTC ACTGTACGGC GATCCGTCCC AACAGGACAC CTACCACGTC GCGGTACTGC GCGAGCCCGA CGGCCGGGGC GGTTCCATAG AGATCCACGA CCTCCGCCGG GGCTCCGCGC TGCGACTTCG CGGCCCCCGC AACAACTTCC CGCTCACCGA CGCGTCGTCC TACCTGTTCG TCGCGGGCGG CATCGGCATC GTCCCGTTCC TGCCCATGAT CGAACACCTC GACGCCGCAC GAGCCGACTG GAAGCTCGTC TACCGTGGAG CGTCACTGTC CCGTATGGCC TTCGCCTCCG AACTGGCCAC CCGCTTCGGC TCCCGCGTCC GGCTGCTGCC CGCCGACACC CACGCCCGCC CCGACCTCAC CGCGCTGCTG CGCGACACGT CGGAGTCGGT CGCCGTCTAC AGCTGCGGCC CCGAGACCAT GCTCAACGCG GTCGAACTCG CCGTGGCCGC CCACCGCCCC CACGGCAGCC TGCACCTGGA ACGCTTCGCC GCCAGCCAAC GCGAAACCGC CCCCAACACG GCCTTCACCG CCGAGCTGGC CGACAGCGAC GCCACCGTCG AGGTCGCCGA ACACGAAACG CTGCTGACTG CGATCCAGCG CGTCAACCCC GCCATCGATC TGTCCTGTGA GGACGGGATC TGCGGCAGCT GCCGCACCCG GGTCCTCGAC GGCGTCCCCG AGCACCGCGA CGACGTGCTG CAACCGCACG AGCGGGACCG CGTCGACGTG ATCTACCCTT GTGTCTCCCG CGCCCGGGGC GCGCGGATCG TCCTCGACGT GTGA
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Protein sequence | MPTPSGGHSR AARVIQFVYT GLALLLSQLP PLFPPTFPDA RVPAWYATAA LTAVVAVLAT WRPRTPRAVI LTLAWGQALV TMVNAFVIGD ILAMFSTWVS IPALALLAGQ IGPRARKALL ATHVITSAIW LGVGVTFVLV SVIAMTTTGI EAARVSYELL VVFDMTLLPN ANFAASLAGI ALGLTTAWGL MRYWWVAIKF FIPLVILFGA FGYMHPMLES AAAQATRLAE TGGTVSQIDG AAEAVFWSFG VSTLSLAAAM LLSLYKPGGR TRRGRRQLEQ ARQRRAAART VPVAATAPAA TTAAASAASA SPTATSVPTT PNASPTAASV PATASDLPTA ASVPATELAA VVADTRLIAD DTAAVTLRAA DGSPLPHWAP GAHIDLVLPS GKVRQYSLYG DPSQQDTYHV AVLREPDGRG GSIEIHDLRR GSALRLRGPR NNFPLTDASS YLFVAGGIGI VPFLPMIEHL DAARADWKLV YRGASLSRMA FASELATRFG SRVRLLPADT HARPDLTALL RDTSESVAVY SCGPETMLNA VELAVAAHRP HGSLHLERFA ASQRETAPNT AFTAELADSD ATVEVAEHET LLTAIQRVNP AIDLSCEDGI CGSCRTRVLD GVPEHRDDVL QPHERDRVDV IYPCVSRARG ARIVLDV
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