Gene Snas_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0888 
Symbol 
ID8882072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp937015 
End bp938988 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content71% 
IMG OID 
Productferredoxin 
Protein accessionYP_003509692 
Protein GI291298414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.986677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.535707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACGC CGTCCGGCGG CCACAGTCGC GCCGCCCGCG TCATCCAATT CGTCTACACC 
GGACTGGCAC TGCTGCTTTC GCAACTGCCG CCACTGTTCC CGCCGACGTT CCCCGACGCC
CGGGTACCCG CCTGGTACGC GACCGCCGCC CTCACCGCCG TGGTCGCGGT CCTGGCCACC
TGGCGCCCGC GCACCCCCCG CGCCGTCATC CTGACCCTCG CGTGGGGCCA GGCGCTGGTG
ACGATGGTCA ACGCCTTCGT CATCGGCGAC ATCCTCGCGA TGTTCAGCAC CTGGGTGTCG
ATACCGGCCC TGGCCCTGCT CGCGGGCCAG ATCGGGCCAC GAGCCCGCAA AGCCTTGCTG
GCGACGCATG TGATCACCTC GGCGATCTGG CTGGGCGTCG GTGTCACGTT CGTGCTCGTG
TCGGTCATCG CGATGACCAC AACGGGCATC GAGGCGGCGA GGGTGTCCTA CGAACTCCTG
GTCGTGTTCG ACATGACGCT GCTCCCCAAC GCGAACTTCG CGGCCTCGCT GGCGGGCATC
GCGCTCGGCC TGACCACGGC CTGGGGGCTG ATGCGCTACT GGTGGGTGGC GATCAAGTTC
TTCATTCCGC TGGTGATCCT GTTCGGCGCC TTCGGTTACA TGCACCCGAT GCTGGAAAGC
GCCGCCGCCC AGGCGACCCG GCTCGCCGAG ACCGGCGGCA CGGTCTCCCA GATCGACGGC
GCCGCCGAAG CGGTGTTCTG GAGCTTCGGG GTCTCGACGC TGAGCCTGGC GGCCGCGATG
CTGCTGTCGC TGTACAAACC CGGCGGCCGC ACCCGTCGGG GCCGCCGCCA ACTGGAGCAG
GCCCGCCAGC GCCGCGCGGC GGCCCGAACC GTCCCCGTCG CGGCGACGGC ACCAGCCGCG
ACAACGGCGG CGGCTTCCGC GGCGAGCGCC TCACCAACGG CCACAAGCGT TCCCACGACG
CCGAACGCCT CACCTACGGC CGCGAGCGTT CCCGCGACGG CGAGTGACTT GCCCACGGCC
GCAAGCGTTC CCGCGACCGA GCTCGCCGCC GTCGTGGCCG ACACCCGTCT CATCGCCGAC
GACACCGCCG CCGTGACCCT GCGCGCCGCC GACGGCTCAC CACTGCCGCA CTGGGCCCCC
GGCGCCCACA TCGACCTCGT GCTCCCGTCC GGCAAGGTCC GCCAGTACTC ACTGTACGGC
GATCCGTCCC AACAGGACAC CTACCACGTC GCGGTACTGC GCGAGCCCGA CGGCCGGGGC
GGTTCCATAG AGATCCACGA CCTCCGCCGG GGCTCCGCGC TGCGACTTCG CGGCCCCCGC
AACAACTTCC CGCTCACCGA CGCGTCGTCC TACCTGTTCG TCGCGGGCGG CATCGGCATC
GTCCCGTTCC TGCCCATGAT CGAACACCTC GACGCCGCAC GAGCCGACTG GAAGCTCGTC
TACCGTGGAG CGTCACTGTC CCGTATGGCC TTCGCCTCCG AACTGGCCAC CCGCTTCGGC
TCCCGCGTCC GGCTGCTGCC CGCCGACACC CACGCCCGCC CCGACCTCAC CGCGCTGCTG
CGCGACACGT CGGAGTCGGT CGCCGTCTAC AGCTGCGGCC CCGAGACCAT GCTCAACGCG
GTCGAACTCG CCGTGGCCGC CCACCGCCCC CACGGCAGCC TGCACCTGGA ACGCTTCGCC
GCCAGCCAAC GCGAAACCGC CCCCAACACG GCCTTCACCG CCGAGCTGGC CGACAGCGAC
GCCACCGTCG AGGTCGCCGA ACACGAAACG CTGCTGACTG CGATCCAGCG CGTCAACCCC
GCCATCGATC TGTCCTGTGA GGACGGGATC TGCGGCAGCT GCCGCACCCG GGTCCTCGAC
GGCGTCCCCG AGCACCGCGA CGACGTGCTG CAACCGCACG AGCGGGACCG CGTCGACGTG
ATCTACCCTT GTGTCTCCCG CGCCCGGGGC GCGCGGATCG TCCTCGACGT GTGA
 
Protein sequence
MPTPSGGHSR AARVIQFVYT GLALLLSQLP PLFPPTFPDA RVPAWYATAA LTAVVAVLAT 
WRPRTPRAVI LTLAWGQALV TMVNAFVIGD ILAMFSTWVS IPALALLAGQ IGPRARKALL
ATHVITSAIW LGVGVTFVLV SVIAMTTTGI EAARVSYELL VVFDMTLLPN ANFAASLAGI
ALGLTTAWGL MRYWWVAIKF FIPLVILFGA FGYMHPMLES AAAQATRLAE TGGTVSQIDG
AAEAVFWSFG VSTLSLAAAM LLSLYKPGGR TRRGRRQLEQ ARQRRAAART VPVAATAPAA
TTAAASAASA SPTATSVPTT PNASPTAASV PATASDLPTA ASVPATELAA VVADTRLIAD
DTAAVTLRAA DGSPLPHWAP GAHIDLVLPS GKVRQYSLYG DPSQQDTYHV AVLREPDGRG
GSIEIHDLRR GSALRLRGPR NNFPLTDASS YLFVAGGIGI VPFLPMIEHL DAARADWKLV
YRGASLSRMA FASELATRFG SRVRLLPADT HARPDLTALL RDTSESVAVY SCGPETMLNA
VELAVAAHRP HGSLHLERFA ASQRETAPNT AFTAELADSD ATVEVAEHET LLTAIQRVNP
AIDLSCEDGI CGSCRTRVLD GVPEHRDDVL QPHERDRVDV IYPCVSRARG ARIVLDV