Gene Snas_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0883 
Symbol 
ID8882067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp932765 
End bp933673 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content64% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003509687 
Protein GI291298409 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.634184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGAAGA GTGGGAAACA CGTGCGCCGT ATACGCAAAT GGGGACCGGG GCTGCTGCTC 
ATATCACCGT CCCTTGTGCT GCTGGCGGTC TTCGTCTACG GGTTCCTGGG TTGGAACTTC
CAGATCTCGC TGACCGACTG GCAAAGCCTC ATGCCCGTCT ACTCGACCAC GGGCTTCGAC
AACTACTCCA ACCTCGTCGC CGACGACACC TGGTGGCGCG ACGTCAACCA CCTGGTCATC
TACACGGTGG TGTTCGTCGT CGGCGCCCTC ATCGTCGGCT TCGTGCTGGC GCTGCTCATG
GAGAAGGGCG TGTGGGGCGA GGGCGTCCTC AAGAGCGTCT ACCTGTTCCC GATGGCCATG
TCCTTCATCG CCACCGCGAT CGTGTGGCGC TGGCTGATGG ACAACGGCAC CGGTGACAAC
ACCGCGGGCC TCAACAAACT CCTGGGCTCC GTCGGACTGA GCTTCCTCAA GGGAGACTGG
CACAAGTCCG ATTCGGAGTT CGCCATCGCG GCGGTGGCCA TCCCGGCGGG CTGGGCGCTG
TCGGGCTACA TCATGGCCCT GTTCCTGGCC GGAATGCGCG GCGTCCCCGA CGAACTGCGC
GAAGCCGCCC GCGTCGACGG CGCCACCGAA CGCCAGGTCT TCTGGCACGT GGTCCGCCCA
CTCCTGTGGC CCGCGACCAT GAGCGCCACC GTCATCCTGG TCCACATCTC GATGAAGACC
TTCGACCTGC TCTACGCGAT CAACCCCAAG GACGCCAGCA TCGAGACCCC CGCGCTGTAC
ATGTACCGCA GCATGGGCGG CTACCTCTAC GCCCGTGGCG CCACCATCGC CACCATCCTG
GTGATCGCCA TGGCCGTCAT CATCGTCCCC TACATCTGGT ACACCATGCG ATCGGAGCGC
CGTTCGTGA
 
Protein sequence
MEKSGKHVRR IRKWGPGLLL ISPSLVLLAV FVYGFLGWNF QISLTDWQSL MPVYSTTGFD 
NYSNLVADDT WWRDVNHLVI YTVVFVVGAL IVGFVLALLM EKGVWGEGVL KSVYLFPMAM
SFIATAIVWR WLMDNGTGDN TAGLNKLLGS VGLSFLKGDW HKSDSEFAIA AVAIPAGWAL
SGYIMALFLA GMRGVPDELR EAARVDGATE RQVFWHVVRP LLWPATMSAT VILVHISMKT
FDLLYAINPK DASIETPALY MYRSMGGYLY ARGATIATIL VIAMAVIIVP YIWYTMRSER
RS