Gene Snas_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0879 
Symbol 
ID8882063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp928450 
End bp929001 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509683 
Protein GI291298405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.262444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACG ACGAAGCGGC CGAACCGGTC ACGGCGATGC GCACCCTGGA GCGGCTGTCG 
AAGCTCACCG ACGCCCGCAT CACCGCGACC TCACCGCAGG GGCGGGCCCG GGTCACGTTG
CAGGGCGGGC GACACAGCGT CGAGCTGCGT CCGGAGGGCT TCCAGAAACT GGACCCGAAG
CTGCTGGCCG AGGAGGTGAC GCACGCCTTC AACGGCACGC TGCGGGGTCA CCGGCAGCAG
GAGCAGCGCA TCCTCGCCGA GTACCGGGAG GTGCGGCCGC ACCAGCCCAA ACCCCGTGCC
GAGGCCGAAC AGGAGCGGGT GAACCGGGCC CGCGAGGCGG TCTCGGTCAA GGCGACCTCG
GCGAGTCGGC TGGTGCGCGG CACCTGGAGC GCCACCGACG GTGTGAGCCT GAAGATCGCG
GCGGTCAACG ACTCGCACCG GGAGCAGCTG GCCACCGAGA TCGCGCAGGT CCTCAACGAG
CTGTCCGCCA AGTTCCGCAC CGACATGCGC GAGGCCGTCC GCGAGGCGCG ACGGCAGTCC
CGCCAGGGCT GA
 
Protein sequence
MANDEAAEPV TAMRTLERLS KLTDARITAT SPQGRARVTL QGGRHSVELR PEGFQKLDPK 
LLAEEVTHAF NGTLRGHRQQ EQRILAEYRE VRPHQPKPRA EAEQERVNRA REAVSVKATS
ASRLVRGTWS ATDGVSLKIA AVNDSHREQL ATEIAQVLNE LSAKFRTDMR EAVREARRQS
RQG