Gene Snas_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0878 
Symbol 
ID8882062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp927156 
End bp928421 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509682 
Protein GI291298404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.747896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.318853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA TCATGGACAA GGCCTACGAG GTGCAGGAGG CCGCTGCCGC CGCCGCGCTC 
GTGGAGATCG ACGGCGACGG ATACATCGAC TACGTCTTCG ACAATCCGTC CTATGTCCAC
GACTGGCCCG CCGACCCCTA CGACAGTTCC ACCATCTCGG GGATCCCCGG TGCCTTCGCC
TGGATCGGCT ACCGCGACCC CGGCGGCCTG CCGGACAAAC GCGCCGCCGT CGAACGCGGC
CAGTCGGTGC TGGAAGCCTC GCAGGGGGAG TTCTTCCGGC TGAAGAACCT GCTCCACGAC
GACGAGAAGT TCAGCGGCTC GACGGTGAAC ACGTTCATCG ACTACCTGGA CGTCATCGCC
GATGCCGCCG AGGACCAGGC CGGGCTCGCC GACGAGCTGT CCCTCGCCGT GGAATGCGTC
GAAGGGCTCG TCAAGGCCGC CGAGAACGAC GTCATCGACA TCGCCGACAA GACGATCGCG
GCGCTCAACG CGATGGCCGC CGAGGACGAC GTCCCCAACA GCGAGATGCT GCTCAGCGTC
ACCGCCGCGC TGATCGGCGT CGTCGGCACC GTCGCCACCG GCGGAACCGC CACGGCGATC
ACCTTCGCGT TGATCAGCGG CGGCCTGTCG GTCGCGACGA CGGCGGGGAC GGACACCCAG
GGCAGCACGG ACTTCGACAA CGTCTACCAC CTGATCGAGT ACTCGCTGTA CCCGGCGCTG
GACTACCGGC GCGGGAAACT GGAGGAGAAG GAAGGCGAGA TCGTCGACGG CCTCAACGCC
GACCTGAGGG CCCTCGACGG CCAGGGCGGG CACGACGTCC GCGACAGCCT GGACCCCCGG
CCCGGCGGGC TTGTCAACGG CCGCGGCAAC TTCCGCGCCA CCGGCGCCAC CGCCGCCGAC
CTGAAGGAAC TGTACGGTCT GGCGACCGGC GAGGTGCCCG CGCTGGCCGG TGACTTCGCC
ACCGCCTCCG GCGATTTCAA CGCCGCCAAC GGCACCGAGA CCGCCGCGAT GGGCGACGTC
TCGGCGCCGT GGGAGCGGCT GCTGGATCTG CTGCAACGCA TGTCCGCCAA GGCGAGTGAG
GCCCTGTACG ACGGCGGCAC CGTGCTGGCC AACGCCGCGC AGGACTTCGC CAAGCAGGAC
GGCGTGCACG CCGAGTGGGT CAACCGCAGC GGCGAGGAGC TGTTCGACCG GCACGAGGCG
GTGTTCCCGG CGCCGGTTCC CGACCCGCTC AGCCGTCGCT ACCCCGACAT CGGGCCCACC
TTCTGA
 
Protein sequence
MSAIMDKAYE VQEAAAAAAL VEIDGDGYID YVFDNPSYVH DWPADPYDSS TISGIPGAFA 
WIGYRDPGGL PDKRAAVERG QSVLEASQGE FFRLKNLLHD DEKFSGSTVN TFIDYLDVIA
DAAEDQAGLA DELSLAVECV EGLVKAAEND VIDIADKTIA ALNAMAAEDD VPNSEMLLSV
TAALIGVVGT VATGGTATAI TFALISGGLS VATTAGTDTQ GSTDFDNVYH LIEYSLYPAL
DYRRGKLEEK EGEIVDGLNA DLRALDGQGG HDVRDSLDPR PGGLVNGRGN FRATGATAAD
LKELYGLATG EVPALAGDFA TASGDFNAAN GTETAAMGDV SAPWERLLDL LQRMSAKASE
ALYDGGTVLA NAAQDFAKQD GVHAEWVNRS GEELFDRHEA VFPAPVPDPL SRRYPDIGPT
F