Gene Snas_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0872 
Symbol 
ID8882056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp920454 
End bp921197 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509676 
Protein GI291298398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.708532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCCC GCGTGAGCGA TCCCCTTTCG CCCCTGTTGG AGCTCGCCGA AGTCGCCGAC 
TCCTTGGAAA ACGCCCGAGC CGCGGTAGAC CGGACACTGT GGCACCGGCG GCTACGCCGC
GAGGGCGCCC AAGTGGCGAC CGAGGTGTCG CTGCGGTGTG CCGTCGCCTC GGCCACCCTC
GACGGCGCCG AGTACCCGAT CGAAGAGGTG CGCGCCGGAA CCGTCACCGA CCCGGTCGTC
CAGGGGGCGC TGCGGGTCAG CACCGAGCTG CCGTCTCTGG TCACGCTGTG GCCCAAGGCG
CCGCGCCAGG TACTGGCCAA ACTCCACCTG CTGGCCGCCC GCGACCTCGC CGACGTCGAC
CAGCTGGGCC GTCCCGACGC CGACCCCCAC AAGGCGGCCC GCCTCGACGC GCTGTGCGCC
CTGATCACCG CCGAGTCCCG GCTGCCCGCC GCCCTGGTGG CGGCGGTCGT GCACGGCGAG
CTGCTGGCAC TGCGTCCGTT CCCGCAGGCA GCGGGAGTGG TCGCGCGGGC GGCGGCCCGG
CTCACCCTCG CCGCCCGCGG TCTCGATCCC AACCTGCTCA TCGCCATCGA CGCGGGCCAC
GCCGGTCGCG GTCCCGAGTA CACCGGCGCC AGCGGCACCT TCGCCACCGG CACGCCGGAC
GGGCTGCGCT CCTGGCTGAA GCACTGCGGT CTGGCCCTGT CGCTGGGAGC CGAGATCACC
ACCGAGATCT GCAACGGCCG CTAG
 
Protein sequence
MVSRVSDPLS PLLELAEVAD SLENARAAVD RTLWHRRLRR EGAQVATEVS LRCAVASATL 
DGAEYPIEEV RAGTVTDPVV QGALRVSTEL PSLVTLWPKA PRQVLAKLHL LAARDLADVD
QLGRPDADPH KAARLDALCA LITAESRLPA ALVAAVVHGE LLALRPFPQA AGVVARAAAR
LTLAARGLDP NLLIAIDAGH AGRGPEYTGA SGTFATGTPD GLRSWLKHCG LALSLGAEIT
TEICNGR