Gene Snas_0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0855 
Symbol 
ID8882039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp906073 
End bp906894 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content65% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003509659 
Protein GI291298381 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.795905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTGG GTGCCGAAGT CGTTGGGCTT ACCAAGTCCT TCAACGGCAA CAAACCCGTA 
TGGTCGGACG TGTCGCTAAC GGTACCGTCC GGCGATATCA CCGTGCTGCT CGGACCTTCC
GGTACCGGTA AGTCGGTGTT CCTCAAGACG CTCATCGGGT TGTTGCGTCC GGACCGGGGC
AAGGTGTTCA TCGATGGTCA GGAGTTGACC GCGATGAGCG ACCGGGAGTT GTACGCGATC
CGGCAGCGAT GTGGGGTGTT GTTCCAGGAT GGGGCCCTGT TCGGGTCGAT GAACATCTAC
GACAACATCG CGTTTCCGTT GCGGGAGCAC ACGCGGAAGA CGGAGCGGGA GATCCGCCGG
ATCGTGATGC AGCGGCTGGA CGTCGTGGGC ATGGTCGGCG ACGAGGACAA GCTGCCCTCG
GAGATATCGG GCGGTATGCG CAAGCGCGCC GGACTGGCGC GGGCGCTGGT CATGGACCCC
GAGCTGATCC TGTGCGACGA ACCCGACTCC GGTTTGGACC CGGTGCGGAC CGCGCTGCTG
AGCAAGACCA TCGCGGAGCT GAACGCCGAG ACCGGGGCGA CGTTCCTGAT CGTCACGCAC
GACATCAACA CCGCGCGGAC CCTGCCGCAC CACATCGGGA TGCTCTACCT GGGGCAGCTG
GTCGCGTTCG AGCGGCGGGA ACAGATGCTG GCCTCGGACA AGCCGGTGGT CCGGCAGTTC
CTGAACGCCT CGATCGAGGG GCCGATCGGG ATGACCGAGG AGAAGGACGC CAACGGGCAG
AACGGACAGA CAGCGCAGCA GCCGTTCGGG GTCGCCCAGT GA
 
Protein sequence
MGVGAEVVGL TKSFNGNKPV WSDVSLTVPS GDITVLLGPS GTGKSVFLKT LIGLLRPDRG 
KVFIDGQELT AMSDRELYAI RQRCGVLFQD GALFGSMNIY DNIAFPLREH TRKTEREIRR
IVMQRLDVVG MVGDEDKLPS EISGGMRKRA GLARALVMDP ELILCDEPDS GLDPVRTALL
SKTIAELNAE TGATFLIVTH DINTARTLPH HIGMLYLGQL VAFERREQML ASDKPVVRQF
LNASIEGPIG MTEEKDANGQ NGQTAQQPFG VAQ