| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0831 |
|---|
| Symbol | |
|---|
| ID | 8882015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 878250 |
|---|
| End bp | 879284 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | tRNA(Ile)-lysidine synthetase |
|---|
| Protein accession | YP_003509636 |
|---|
| Protein GI | 291298358 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.209005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGAC CGCCCGCCGC CGTCGCCCGA GTGCGGGTCG CGGTGCGGCG GCTGTTGACG
GAGCTGTCGC CGTCGGGGAA CGCTGACGAG TCGCCGTCGT CCGGCGACCG GCTGGTGCTG
GTGGCCTGTT CCGGCGGCCC CGATTCGATG GCGCTGGCCG CGGCGACCGC GTTCGTGGCC
CCCCGTCTGG GAATCCGGGC CGGTCTCGTC ACCGTCGACC ATGGACTCCA AGCTGGTTCG
GCGAAGCGCG CGGCCACCGT CGCCGACTGG GCCCGTGATG CCGGGTTCGA GCCCGTCGAA
GTGGCGACAG TGGAGGTCGA TGTCACCGCC GGCGGCCCCG AGGGCGCGGC TCGTGACGCC
CGCTACGCGG CACTGACCGA AGCGGCCCAA CGACTCGGCG CGTCAGCCGT CCTGTTGGGA
CACACGCGCG ACGACCAGGC AGAGACGGTG CTGCTGGCCC TGGCGCGCGG CTCTGGCCCT
CGCGGGCTGG CCGCCATGCC CCGCAAGCGC CGCAAGTTCC GTCGCCCGCT GCTCGATCTA
CCGCGGGCCG ATACCGTGCG GGCCTGTCGC GATCTCGAAC TGCCGGTATG GGACGACCCG
CACAACACTG ATCCCGCCTA CGCGCGATCC CGGCTGCGAG CCGTGATGCC CGTCCTCGCC
GAGACCTTCG GCGAGCGTTT CGTCGCCAAC CTCGCCCGCA CCGCCACCCT GGTGGCCGCC
GACAACGACG CCCTGGACGC CTACGCCGCC GAGGTGCTCG CCAAGGCCAG CCACGGCACC
CTCTCGGCCG AACTGCTGGA ACCCAACCTC AAACTCGGCC CGCTCAACGC CGCCCGCCGT
GCCGTGCGCA CCAGGGCGTT GCGCGCCTGG GTGCTGTCGG AGGGCGCCGA GGCCGACGCC
CTCTCATACG TCCACATTGA AGCCATGGAG GCGCTGGTGA TGAACTGGCG AGGGCAGGGC
CCGGTATTCC TGCCCGGCAA TGTCACGGTG TGGCGCGAAC GAAACCGGCT GCGGCTGCGC
CGCACCGAAC CCTGA
|
|---|
| Protein sequence | MTGPPAAVAR VRVAVRRLLT ELSPSGNADE SPSSGDRLVL VACSGGPDSM ALAAATAFVA
PRLGIRAGLV TVDHGLQAGS AKRAATVADW ARDAGFEPVE VATVEVDVTA GGPEGAARDA
RYAALTEAAQ RLGASAVLLG HTRDDQAETV LLALARGSGP RGLAAMPRKR RKFRRPLLDL
PRADTVRACR DLELPVWDDP HNTDPAYARS RLRAVMPVLA ETFGERFVAN LARTATLVAA
DNDALDAYAA EVLAKASHGT LSAELLEPNL KLGPLNAARR AVRTRALRAW VLSEGAEADA
LSYVHIEAME ALVMNWRGQG PVFLPGNVTV WRERNRLRLR RTEP
|
|---|
| |