Gene Snas_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0813 
Symbol 
ID8881997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp860374 
End bp862383 
Gene Length2010 bp 
Protein Length669 aa 
Translation table11 
GC content72% 
IMG OID 
Productserine/threonine protein kinase with WD40 repeats 
Protein accessionYP_003509618 
Protein GI291298340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTACC CCGACGGGAG TACTTTGGGG GGAAGTATCT CGGCTGGGTG GTGGCCAATG 
CAGCCCCTCG AAGACGGTGA CCCGGAACGG ATCGGCCGGT TTCGGTTGGA ATCTCGGCTG
GGCTCGGGCG GGACGTTTCT GGGGCTTTCC GAGGGTGGCC GCACGGTCGT GGTGAAGCTG
CTCGATGCCG GTGCCGCCGC TGCGCCGGGG CTGCGGGAAC GGTTGTCGGC GATGCGGGGC
GTCGGCGGAT TCGCACTGCC GCAACTGATC GACGTCGACC TGGACGCCTC GCCGCCGTGG
CTGGCCACGG CCTACGTTCC GGGGCCGAGT CTGTCGGCGG TTGTCGATGA GCGCGGTCCG
CTGCCGGAAA CCGAGGTCGC GGCACTGGGA GCGGCGCTGG CCGAAGCGTT GGACGCGATG
CACCAGTATG GACTCGCGCA CGGCGATCTC AAGCCCGGCA ACGTGATCAT GGCGTCCGAC
GGTCCCCGGC TCGTCGACGT CGGTGTCGCC GTGGCCGACG CCTCACCCGC CGCCGACGTG
TTCGCGCTGG GCCGAGTGCT GACCTTCGCC GCCACCGCGA CGGATCCGGT CGCGGCCGAG
GCGCCGTGGC CGGACGGCAT CGACGGCGAG CTGCGCGAGG TGCTGGCCGC GTGCCTGGCG
CGCGATCCGC GTGAGCGGCC CGGTGCCGTG GAGGTACTGG AGCGACTGGC GAACCACCGC
GCGACCGGCG CGGAGTCGCT GTCGGTCACA TCGTTGACAT CAACCGAAAG TCGGCCGACG
CCGCGCTCCG GACGACGGCT GCTCGGACGC GGCGGGCCCG GCACCGGCGG CCTACGGCTT
CGCCGCCGCA CCATCCTGAT GGGCGGGGCC GCGATCCTGG CCGCGACGGC GGTACCGGCG
GCGCTGGCGT ACTGGCCGAG CCCACGCGGA CAGCGACTCA CCGGCATGGC CGTCACCTCG
GTGGCGTTCT CGCCAACCGG CGACATCGTG GCCGGAGGTG GCGGCAACGA GAACCGCCCC
GAAGGCGACG GTCGCCTGTG GAACCCGGAC ACCGGCCGCG AGCTCGGGGT CATGGACGGC
CGTGGCATCA GCGGCGTCGC CTTCAGCGCC GACGGCGGGG TGCTGGCCAC CAGCGGACCC
CGGGGCGCCC GGATCCGGGA CCCCGACACC GGCGAGACGA TCGCGATGTT CGACGTGTCC
GCGCGCGAGA ACGTCAACGA GGAGGTCTGG GCGGTGGCGT TGAGCGCCGA CGCGAAACGG
CTCGCGGTCG GCGGCCGCAC CCTCGACGAG ATCGAGACCG TATGCGTGGT CTGGAACGTC
TCGGGAACCG AGCGGATCGC GTCCCTCACC ACCACCGACA TCCACTGTGT CCGATCGGTG
GCGCTGAGCC CGGACGGCCG GTGCGCCGCC CTGGCGGGAG TGGCGCGCGG CTCGGGAACC
GCGAACAAGG CAAACTACGC GATGGAGAAC GGCGCCGGTT GCTGGCTGTG GGGGCTGGAG
TCCGGCAACG CGTGGGGCCT GCGGAAAGGC GAACTGCGGG TCGTCTACAG CGGCGGCTAC
GCCAACGCGG TCGCGTTCGG GCCCGACGGC GACACGCTGG CCGTGGCCAG CCGCGACTCC
GGCTGCCGAC TGTGGACACC GGAGTCCGAG CGCGCGGCGG TGACGTACAC GACCGATCCG
GTCAGCGGCA TCGCCTTCAG CCCCGACGGC GCGGTGCTGG CGACGGCGGG CACCGGCGTC
GCCTTCGGCA TGGACCGCTT CGGCCGCTTC GAAGTCGAGG GCGGCCCGGC CGAGGCCGCC
GACGGTCCCG GCAAGCAGGT CTCGGGCGCG GGCATCCGCC TGTGGAACAC GACCTCCGGG
GACCACCTCG ACACCGTCAC CGAGGACTAC GCCACCAGTG TCGCCTTCGG ACCCGACGGC
CGCACGATCC TCGGTTCGGG CGGCGACGGC GGCACGGACA CGGCCACCGG CTGCTGGCTG
TGGCCGATCG GCTTAGTCGG CGCCCAATAG
 
Protein sequence
MGYPDGSTLG GSISAGWWPM QPLEDGDPER IGRFRLESRL GSGGTFLGLS EGGRTVVVKL 
LDAGAAAAPG LRERLSAMRG VGGFALPQLI DVDLDASPPW LATAYVPGPS LSAVVDERGP
LPETEVAALG AALAEALDAM HQYGLAHGDL KPGNVIMASD GPRLVDVGVA VADASPAADV
FALGRVLTFA ATATDPVAAE APWPDGIDGE LREVLAACLA RDPRERPGAV EVLERLANHR
ATGAESLSVT SLTSTESRPT PRSGRRLLGR GGPGTGGLRL RRRTILMGGA AILAATAVPA
ALAYWPSPRG QRLTGMAVTS VAFSPTGDIV AGGGGNENRP EGDGRLWNPD TGRELGVMDG
RGISGVAFSA DGGVLATSGP RGARIRDPDT GETIAMFDVS ARENVNEEVW AVALSADAKR
LAVGGRTLDE IETVCVVWNV SGTERIASLT TTDIHCVRSV ALSPDGRCAA LAGVARGSGT
ANKANYAMEN GAGCWLWGLE SGNAWGLRKG ELRVVYSGGY ANAVAFGPDG DTLAVASRDS
GCRLWTPESE RAAVTYTTDP VSGIAFSPDG AVLATAGTGV AFGMDRFGRF EVEGGPAEAA
DGPGKQVSGA GIRLWNTTSG DHLDTVTEDY ATSVAFGPDG RTILGSGGDG GTDTATGCWL
WPIGLVGAQ