Gene Snas_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0812 
Symbol 
ID8881996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp859415 
End bp860320 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003509617 
Protein GI291298339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCC CAGTCGAAAC CAGGAAACTC ACCAAGAAGT ACGGGCCCAT AACCGCCGTG 
GACGCCCTGG ACCTCACCGT CCGCCCCGGC GAGGTCTACG GCTTCCTCGG CCCCAACGGC
GCCGGGAAGA CCACGACGCT GCGGATGCTG CTCGGCCTCA TCAAGGCCAG CTCCGGCACC
GCGACCGTGC TGGGCCGCAA GCCCGGTACC GCCGACCACC TGTCCCGGGT CGGCGCCCTC
ATCGAGGGCC CCAGCTTCTA CCCGTACCTG TCGGGCCGTT CCAACCTGCG GGTCATGGCC
AAGTACGCGG GCGTCCCCGA CTCCCGGGTG TCCGAAGTGC TCGAACTCGT CGATCTGGCC
CAGCGCGGCA AGGACCGCTA CTCCACCTAC TCCCTCGGGA TGAAACAGCG CCTCGGTGTG
GCCGCCGCGC TGCTGAAGGA ACCGCAACTG CTCATTCTGG ACGAACCCAC CAACGGCCTC
GATCCGCAGG GAATGGCCGA CATGCGCACC CTGATCCGCG GCCTCGGTTC CGCGGGCTGC
ACGGTGCTGC TGTCCAGCCA CCTGCTCGGC GAGGTGCAGC AGATCTGCGA CCGGGTCGGC
ATCGTGTCCG GCGGCCGCCT CATCACCGAG AGCACGGTGG CCGACCTACG CGCCGCCCAG
CACGTCCGTG TCACCGCCAC CCCGCTGGAC AAGGCCGCGT CCGTGGCCCG CGAACTGCTG
GGCGTCGAGG CGGTGCGCGT CGTCGACAAC CACCTCGAAC TCGCGGTCGA AGCCGACCAG
ACGCCCTGGC TCAACGCCGA ACTCGTCAAG GCCGACGTGG CCGTGTCGGA ACTGCGCTCG
CACGAGCGCG ACCTCGAAGA CATCTTTTTC GAACTCACAG GAGAGGAACT GTCCCATGTG
GGCTAG
 
Protein sequence
MNLPVETRKL TKKYGPITAV DALDLTVRPG EVYGFLGPNG AGKTTTLRML LGLIKASSGT 
ATVLGRKPGT ADHLSRVGAL IEGPSFYPYL SGRSNLRVMA KYAGVPDSRV SEVLELVDLA
QRGKDRYSTY SLGMKQRLGV AAALLKEPQL LILDEPTNGL DPQGMADMRT LIRGLGSAGC
TVLLSSHLLG EVQQICDRVG IVSGGRLITE STVADLRAAQ HVRVTATPLD KAASVARELL
GVEAVRVVDN HLELAVEADQ TPWLNAELVK ADVAVSELRS HERDLEDIFF ELTGEELSHV
G