| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0687 |
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| Symbol | |
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| ID | 8881871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 725043 |
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| End bp | 728054 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003509493 |
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| Protein GI | 291298215 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.622837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTTC GGATTCTCGG ACCTCTAGAC GTCCGGCTCG ACGGCTCGAC CGTCCCCATT
CTCGGCCAGC ATCAGCCGAA GCTGCTGGCG CTGTTGCTGC TGGAGAACGA CAGGACGGTC
TCACTGGGGC GGATGGTGGA CGCGCTGTGG GATGACGACC CCCCGGCGAC AGCCAAGCGT
CAGGTCCAAA ACGCCATGGC GGCGCTGCGG CGTTCACTGA CCGAAGCCGA GCTGGACCCG
GTAGCGCGAG TCGGCGAAGG CTACCGATTG ACCACGTCGG AACTGGACCA CAGCGAATTC
ACCACATTGG TCCGGCGTGG ACGCGGCGCC GCTGAGGCGG GCCGGTTCGA CACCGCCTTC
ATGACCTTGA CCGACGCTTT GGGTGTGTGG CGAGGGCCCG CGTTGGCGGG TATCCCCGGT
CGGATCTTCG AAGCAGCCGC CAATCGGTTG GAAGAGGAGC GGCTGTCGGT GATGGAGGAC
AGATTCGCCG CGGCGCTGGC CTCGGACAGA AGCGCGGAGT TCGTCGGCGA GCTGCGAGAG
CTGGTCGCCG AACACCCATA CCGGCAGCGA TTCACCCAGC ACCTCATGAC CGCGTTGCAC
CGCGTTGGGC AGACCGAGGT GGCATTGGCG GCCTTTGATC ACCTCGGCTC ACGGCTTCGC
GACGATCTGG GACTGGATCC CGACCCGGAC CTGCGACGAC TGCGTGACAG CATCCGCGAC
GGCGAGGACT CCACGATCCA CTCTTCCGCC GTCGTGTCGA CGCAGGCACC GCCACCAGCT
CAGCTTCCGG CGAGCATTCG CGGGTTCATT GGCCGCGGTG AACAGCTTTC CGAACTCGAC
GCATTGCTGG CGGAGAATCC TCAGCATTCG GTCGCGGTGC TTAGCGGAGT CGGCGGTTCG
GGGAAGACCG CGTTGGCTAT ACATTGGGCC GCCGAAAATC GAGAACAGTT CCCCGATGGA
CAGCTCTATG TGAACCTTCG CGGATTCGAC ACGACGGAAC CGGTCAAACC CGTCGACGCG
CTGCATGCCT TCATCCGGGC ATTGGGGCAC AACGGCGATT CACCAGCCAG TATCGATGAC
GCGGTGACGC TGTATCGCTC CCTCCTTGCC CGGCGGCGCG TCCTTGTCGT CTTGGACAAC
GCGCTGAATG CCGACCAGGT ACGGCCGCTG CTGCCAATCG GCGTCAACGT AACGCTGGTG
ACCAGCCGGG AACGCCTCAC CCCGCTGACC ACGACAGAGT CTGCCCAATC GGTTTCACTC
GACGCGTTGA GCCGGTCGGA GGCGTTCGAC TTGCTGACCG TGATGATCGA TACACGGCGA
CTGCACGAGG ATGAGCTCGC GGTCTATCGA CTTACCGACC TGTGTGGACA TCTTCCACTG
GCTTTGCGCA TGGCTGGCGC GAACCTTGCC AATCGTCCAC ACACCTCCGT CGCGACGTTC
GTCGACGAAC TGGACAGTTC CTCAGACCGG CTCGAACTGC TGGCCGTGGA GGGTGATCCA
AAAGCGGCAC TGACATCGGT GTTCGATCGG TCGATCGCCG CGATCAGCGA CGAAGCTCGA
CTCTTGCTGC TTCGGCTGGG CTTCATCCCG ACTGCCGACT ACGCCGAAGA GCTCGTCATC
GAACTCAGCA CGGAGGAAGC CGACAAGACA CGGGAGTTGT TGACGCGGCT CGCCGACGCG
CATCTGCTTG AACGCCATCG GCCCAACCGA TACCGTTTTC ACGACTTGAT CAAGGCGTAT
GTCAGCACAC GGCTGACCGT CGAACTGGAT GAAACCACCC GTGATGAGCT GGTGCGACGT
TTCACCGACT GGCAAGTATC AACGCCTCGC GGTGAAGAGT TCGACAACAT CGTGGAAGCT
TGCCGAGCCT GGCGTCGACG GCCACGTATC TGGAAACTGG CCGCCGGGCT CCGCCGACTG
CTGCATTGGA CGGTGAACGT CCACACCGTC ACGCAACTCG CGACCCAGCT GTTGGCGGAA
ACGATCGAGG CCGGCGACCC TTACGGCGAA ATCGAGATGC GTCATCTGCT AGGAATGACG
GCTTGGGTGG CCGGTCATGC AGACGAGGCC GAGCGTTACT GCCGAGAGGC CATCGCCTTG
GCCGCCGTGC AAGGCGATGG GGACGCGAAC GGAACGATCC GAACCAACCT GTCTACAGTG
CTTTCCACTC GGGGCGGCTT CGACGAAGCG GCGCAACTGC TGGCCGAGAC CCTCGAACTC
GCCGAACAGA CGGGCGCGAC GGTGGACCGC GAGGTGCGAG CCCTCAATCT GGGAGCTCTG
TATCGCCAAC TCGGACGATA CGACGACGCT TGGCGCATCG TCGTCAGTTC AGAAGTCGAG
ACTCGTACGA CCGTGCCGCA AAGTACCGCC TTGCCCGCGG GCATGCTGTA CTTCGACATG
GGCCGCTACG CGGACCTCAA AGCGTGGCTG AGCTGGGTCC TGGCCGAAGA GTATTCCCAG
CTCGTGCCGC CCCAGGTCCG CACCATCGCG CTGGGGCTGC GAGGTGAGGT GCACCGTATC
GAGGGCGAAT ACGAAGCAGC CCGGACCGAT CTCGATCAGG CCATCGCCAT CGCGGAACGC
TCCGGCAGGA CCGCGATCGC GTACGAGGCG CGCTGCACAC TGGCCCAGCT GCACTGTGAC
ACGGGTGAGG CCGAACGCGG GCTGGCTCTC GTCGAGCACG TTCTCGCCAC ACCCGACGCC
GCCAGAAAAC CTGATCTACT CGCGCTGGCC CGGTTGACAG CTGCCCGAAT AAGTCGGCGA
ATCGGCGAGT TCCCGACAGC GAACCACCAT GTGTCGGCCG CGTTGGAGAT ATCCGAGAGC
ATCTCCCAGC CGCTGCGGAT CGGCCGATGC CTGCTGGAGA AGGCCCTGCT GTGTGCCGAC
CTCGGCGACG GCTCCCAAGC CGAAACCCTC GGTCGCCAGG CACGAGACAT CTTCGACGAT
CTCGGCGTCC CGGAGGCGGA GCACGCGCGC TCGCTGCTCG ACACGCTGCG CGCCGCTCCC
CTGCAGCGGT GA
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| Protein sequence | MEFRILGPLD VRLDGSTVPI LGQHQPKLLA LLLLENDRTV SLGRMVDALW DDDPPATAKR
QVQNAMAALR RSLTEAELDP VARVGEGYRL TTSELDHSEF TTLVRRGRGA AEAGRFDTAF
MTLTDALGVW RGPALAGIPG RIFEAAANRL EEERLSVMED RFAAALASDR SAEFVGELRE
LVAEHPYRQR FTQHLMTALH RVGQTEVALA AFDHLGSRLR DDLGLDPDPD LRRLRDSIRD
GEDSTIHSSA VVSTQAPPPA QLPASIRGFI GRGEQLSELD ALLAENPQHS VAVLSGVGGS
GKTALAIHWA AENREQFPDG QLYVNLRGFD TTEPVKPVDA LHAFIRALGH NGDSPASIDD
AVTLYRSLLA RRRVLVVLDN ALNADQVRPL LPIGVNVTLV TSRERLTPLT TTESAQSVSL
DALSRSEAFD LLTVMIDTRR LHEDELAVYR LTDLCGHLPL ALRMAGANLA NRPHTSVATF
VDELDSSSDR LELLAVEGDP KAALTSVFDR SIAAISDEAR LLLLRLGFIP TADYAEELVI
ELSTEEADKT RELLTRLADA HLLERHRPNR YRFHDLIKAY VSTRLTVELD ETTRDELVRR
FTDWQVSTPR GEEFDNIVEA CRAWRRRPRI WKLAAGLRRL LHWTVNVHTV TQLATQLLAE
TIEAGDPYGE IEMRHLLGMT AWVAGHADEA ERYCREAIAL AAVQGDGDAN GTIRTNLSTV
LSTRGGFDEA AQLLAETLEL AEQTGATVDR EVRALNLGAL YRQLGRYDDA WRIVVSSEVE
TRTTVPQSTA LPAGMLYFDM GRYADLKAWL SWVLAEEYSQ LVPPQVRTIA LGLRGEVHRI
EGEYEAARTD LDQAIAIAER SGRTAIAYEA RCTLAQLHCD TGEAERGLAL VEHVLATPDA
ARKPDLLALA RLTAARISRR IGEFPTANHH VSAALEISES ISQPLRIGRC LLEKALLCAD
LGDGSQAETL GRQARDIFDD LGVPEAEHAR SLLDTLRAAP LQR
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